Serpula lacrymans: SERLADRAFT_450051
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Entry
SERLADRAFT_450051 CDS
T03135
Name
(RefSeq) hypothetical protein
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
sla
Serpula lacrymans
Pathway
sla03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SERLADRAFT_450051
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sla03019
]
SERLADRAFT_450051
Messenger RNA biogenesis [BR:
sla03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
SERLADRAFT_450051
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A_exo1
PMC2NT
HRDC
Motif
Other DBs
NCBI-GeneID:
18816613
NCBI-ProteinID:
XP_007319481
JGI:
450051
UniProt:
F8NYP8
LinkDB
All DBs
Position
Unknown
AA seq
879 aa
AA seq
DB search
MENQGGGLSPSSFDDYNAKLQAAALKATKYALSLPSDLTFHQTMNSDLAEDLDSFSSRVL
SMANDLLALVETTGSSNSTRAKGKMKLESQDDVVDNFHSLVVDSMDQLLERTDTCLDEFL
GRRKAPAIAINPTQLPLQKSHKPNASRGRLDPTWQHASHLPKPQLSFKTKVDNTVDSPWH
PTLRHKYNAQVPLGYIYRDSEEDADSTKLNLHPYQYEIKHTPYPPSMFQIRSPQPPKILE
ETPLSWVSTSADFSAMLEKLRQATELAVDLEHHSYRTFSGFLCLMQISTRDEDFIVDTLA
LREELSELNEVFTDPRIVKVFHGAESDIVWLQQDFNLYIVNLFDTFHASKAIGFPKHGLA
SLLEMYCDFTPDKQYQLADWRMRPLPDEMLAYARSDTHYLLFIYDNLRNALIDLAQSRAQ
SSQNESSSGPAADPAHALIRQVLFRSEETALRVYERELYDAEDGSGPGGWDGLARKWNKG
TLMASARGSVRQEVYRSVHAWRDRVSREEDESTRYVLPNHYLFQLAEQPPSDMPALLAFF
QHVPPVIRRRAKELLDSVRDAVARYGGSNATLIEKTESITISEDTVITDLPSPNIVDQIG
KPAVEAAISRLWPSTTSTSSITTQSSSLLGSTASSSVKSRQVAYSALRSSLFGPKLTPAV
PPSDVNTQFKDIVSRIHSTLVIVPSAPKIVSQIVETTDQKVVQTGSTLTATATKTAAISH
TDLHPNGSAGPMEIPYVPQRQRQANLKDEPIDDSIVIVGQARQKKRKRPKTLNAHEREPG
AAPDESDAGALSNPKKAKKEEREQAKEISTSSPDIEPFDYSVAPNMLDNGHLPREGINKR
NLKRAQKKNREAAIDYGNFRAPPQAYREVKSGNKTHTFK
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atggagaaccaaggcggtggtctgtcgccgtcttcattcgatgactacaacgcaaaactt
caagccgctgcattgaaagcaactaaatatgcactatctcttccttccgatcttactttt
catcagaccatgaattctgaccttgccgaggacctggattcattctcatcaagagtactt
tccatggccaatgatctactggctttggtggaaacaacggggtcctcaaacagcactcgc
gcaaagggcaagatgaagttagaaagccaggatgatgtcgtagataactttcactcattg
gtggtcgattcaatggatcagttgttggagcggaccgatacgtgtctagacgagttcctg
gggcgcagaaaagcaccagccatagccatcaatcctacacagctgccattacaaaaatcg
cacaaacctaacgcatcgagaggccgtttggaccctacatggcaacatgcttcgcattta
cccaagccacagttatctttcaaaaccaaagtcgataataccgtcgattcaccatggcat
cctacattacgacataaatacaatgcacaggttcctcttggttatatttatcgtgattcc
gaggaggacgctgattcaacaaaactaaacttgcacccttatcagtatgaaatcaaacat
acaccttacccgccgtcgatgttccaaatccgttctccccaacctcctaaaatattggaa
gaaacaccgttgtcgtgggtctctacttcagctgatttctccgctatgctagaaaagctc
cgtcaagccaccgagttggcagtggacttggagcatcacagttacagaacgttctctggc
ttcctctgtttgatgcagatcagcacgcgggatgaggatttcatagtggacactctggca
ttgagagaagaactgagtgagctcaacgaagtttttacggacccacggatcgtaaaggtg
ttccacggagccgaaagcgacatcgtgtggcttcagcaggatttcaatctttatattgtc
aacttatttgacactttccatgcttccaaggcaataggatttccaaaacacggtcttgca
agcttgctcgagatgtattgtgatttcacaccagataaacagtaccaattagctgactgg
cgaatgaggcccctcccggatgaaatgcttgcttacgcacgctccgacactcattacctc
cttttcatttacgacaatctccgaaatgcactcatcgaccttgctcagtcacgtgcccaa
tcatcgcagaacgaatcttcctctgggcccgcagctgatcctgctcacgcgctcattcgt
caagttctttttcgttctgaagaaactgcgctgcgcgtatatgagagagaactgtatgat
gccgaagatggaagcgggccgggagggtgggacgggttagcacgaaagtggaataaaggc
acactcatggcttctgcgagaggaagtgtgcggcaagaagtttatagatctgttcacgcg
tggagagatagagtgtctagagaggaggacgagagcacaaggtatgtattacccaaccac
tacctttttcaactcgcagaacagcctccatcggacatgcctgcattactggcgtttttc
caacatgttcctcctgttatccgacgtcgtgcaaaggagctattggactcagtgagagat
gcagtagctcgctatggcggtagtaatgccacacttatcgagaaaacggaatctattacg
atatcggaagatacagttatcacagacttaccgtccccaaatatagtggatcaaattggg
aagcctgcggtggaagcagccatttcaaggctgtggcctagtacaacttccacgagttca
ataacaacacagtcatcttccctacttgggtctaccgcatccagcagcgtgaagtctaga
caagtcgcatattctgctctacgaagttcgctttttggtcccaaattgactccagcggtt
ccaccatcggatgtaaacactcaattcaaagatatcgtttcgcgcatccacagcacgctg
gtaattgtaccctcggcacccaagattgtatcccaaattgtggaaaccactgaccaaaaa
gtcgtgcaaacgggcagcacacttactgccacggctactaagactgctgctatatcacat
acggatttacatcctaatggatccgcaggaccaatggaaatcccttacgtccctcagcgt
cagcggcaggcgaacttgaaagatgagcctatcgatgactcaattgttatcgtgggccaa
gccaggcaaaagaaaagaaagcggccgaaaaccctgaatgcacatgaaagggaacctgga
gctgccccagatgaatctgatgcaggagcactgtcaaaccctaaaaaagccaagaaagaa
gagagggagcaggcaaaggagatttcgacttccagcccagacatagaacctttcgattac
tctgtcgctccgaatatgctcgataacggacatcttcctcgagagggtataaataagcgt
aacttgaaaagggcgcagaaaaagaatagagaagctgcgatagactacggcaattttcgt
gccccaccccaggcttatcgggaagtcaaaagcgggaacaagacacatacgttcaaatag
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