Serpula lacrymans: SERLADRAFT_451235
Help
Entry
SERLADRAFT_451235 CDS
T03135
Name
(RefSeq) hypothetical protein
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
sla
Serpula lacrymans
Pathway
sla03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sla00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
SERLADRAFT_451235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sla03041
]
SERLADRAFT_451235
Spliceosome [BR:
sla03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
SERLADRAFT_451235
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40_Prp19
Beta-prop_THOC3
WD40
Beta-prop_WDR3_1st
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
WD40_Gbeta
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
EIF3I
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML
Beta-prop_WDR75_1st
PRP4
ANAPC4_WD40
Beta-prop_Aladin
WDR90_beta-prop_4th
Beta-prop_WDR41
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
NBCH_WD40
Beta-prop_TEP1_C
Beta-prop_IFT122_1st
Beta-prop_SCAP
Beta-prop_RIG_2nd
RMC1_N
WD_LRWD1
WD40_like
Beta-prop_EIPR1
Beta-prop_WDR75_2nd
Beta-prop_RIG_1st
Motif
Other DBs
NCBI-GeneID:
18816723
NCBI-ProteinID:
XP_007320919
JGI:
451235
UniProt:
F8P2J6
LinkDB
All DBs
Position
Unknown
AA seq
506 aa
AA seq
DB search
MSELTYDTLMDDGNYLGSERARMENKVILDELERKKKARNMAVPTDDNRVKARLREIGEP
ITLFGERQADRRDRLIYVLSQINAARGDDAMQVEEESSEESEDEQEEFYSLGSLELLEAR
RRLAEYSLPRAQKRVAQQRIDSKMSLGRIIDLRKKIFAEVKKYSNLGSQIGDERPISQVR
FAPNSKILATGSWSGTVKLWSVPACTTIRTLRGHGERVGGVAWHPQATLSQGEGLVNLAS
GSGDMNVNLWSLNSDVPLSVMKGHADRICRVAFHPSGDYVASASFDTTWRLWDVATSKEL
LLQEGHSKEVYSVEFQDDGALVASGGLDAIGRVWDLRTGRTAMVLDGHVQAIFAIAFSPN
GYQIATGAGDDTIRIWDMRSLKALYTIPAHLSNVSDIRFFRGGDLPTKQIATDITMNGTE
ENPDESHDVETNISEEWKYRSGSYFASSGYDGFVKLWSADDWQLLRTLATDAGKVMSVDL
SSDAQLLASGTYNRNFQLFAPEDVPV
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagctaacatacgacacgctcatggacgatggtaactatctaggctctgaaaga
gcccggatggaaaataaagtcatcttggacgaattggaacggaagaagaaagcaaggaat
atggctgtaccgacggatgataaccgcgtaaaagcaagacttagggaaatcggagaacct
attaccttgtttggtgaacggcaagcagatcgtagagaccgtctgatatatgtcctgtca
caaataaatgctgctcgtggcgatgatgcaatgcaagtagaggaggaatcctccgaagaa
agcgaagatgagcaggaagagttctattcattaggctcgttagagcttcttgaggcacgt
agacgcttagcggagtactctctccccagagctcaaaagcgagtcgcccagcagcggata
gacagcaaaatgtctttaggtcgaatcatcgacttgagaaaaaagatatttgctgaagtc
aagaaatacagtaatctgggctcgcagataggcgacgagcggccaatatcacaagttcgc
tttgcaccgaatagcaagatccttgctacaggtagctggtcgggaacagtgaaattatgg
agtgttccagcttgtacgactattcgaactctgcgagggcatggtgaacgagtgggaggt
gttgcatggcatcctcaagcgactttgtcccaaggtgaggggctagtcaatcttgccagt
ggttctggggatatgaacgtgaatctgtggtctttgaacagtgatgtaccgctttcagtg
atgaaagggcatgcagacagaatctgccgtgttgcctttcatccttccggtgactatgtt
gcgagtgcaagtttcgatacaacttggcggttatgggatgtggcaacctcaaaagaactg
ctactccaggagggtcactcgaaagaggtctactcagtggaatttcaagatgacggggcc
ttggttgcttctggtggccttgatgctattggtcgggtttgggatcttcgtacaggtcgc
acggctatggtcctcgatggccatgttcaagcaatatttgcgatcgctttctcaccaaac
ggataccaaattgccactggcgctggtgacgatactattcggatatgggacatgcgctct
ctaaaggccctgtacaccatccctgctcatctttctaacgtttccgacattcgtttcttc
cgaggtggtgatctaccaacaaaacaaatagcaactgacatcaccatgaatgggacggag
gagaatccagatgagagccatgacgtagagacgaatatatcggaggagtggaaatatcgg
tcagggtcatattttgctagttctgggtatgatggcttcgtcaaattatggagtgcggat
gattggcaactccttcgcacccttgcgacggacgctggaaaagtcatgtcagtcgactta
tccagtgatgcccagctccttgcatcagggacgtataaccgtaatttccagttgtttgcg
cctgaggatgttccggtataa
DBGET
integrated database retrieval system