KEGG   Serpula lacrymans: SERLADRAFT_453661
Entry
SERLADRAFT_453661 CDS       T03135                                 
Name
(RefSeq) hypothetical protein
  KO
K14404  cleavage and polyadenylation specificity factor subunit 4
Organism
sla  Serpula lacrymans
Pathway
sla03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:sla00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    SERLADRAFT_453661
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sla03021]
    SERLADRAFT_453661
   03019 Messenger RNA biogenesis [BR:sla03019]
    SERLADRAFT_453661
Transcription machinery [BR:sla03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     SERLADRAFT_453661
Messenger RNA biogenesis [BR:sla03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     SERLADRAFT_453661
SSDB
Motif
Pfam: zf-CCCH zf_CCCH_4 Torus zf-CCCH_2 zf-CCHC zf-CCHC_3 zf-CCCH_4 zf-CCHC_2 F-box_5
Other DBs
NCBI-GeneID: 18816945
NCBI-ProteinID: XP_007323849
JGI: 453661
UniProt: F8PBS8
LinkDB
Position
Unknown
AA seq 304 aa
MSMANPLAGPSPLRDLVHPHFHQNNFPEEFFVKNKLGIKLDKDDQICRLSLTPTGCPLGP
LHCPLRHTSPSAQNFQPPKQLPTHPRDRERLATVCKHWLRGLCKKGDACEFLHEYNLRRM
PECWWFAKYGYCSAGDECLYAHPKERRVECPDYKRGFCKLGPTCPRKHVRRVACQLYLTG
ICPLGPDCPRGHPKPDLPSARAYEPPSPPSTRELGPPPPGYGRYADFDRGFPGGGGGGGG
GGPGQAHGAPAGNANGPPRRNLDDVLCFKCGEKGHYANHCRNRNVPGNRGGMDRSSRRFP
GGEE
NT seq 915 nt   +upstreamnt  +downstreamnt
atgtcaatggctaatccgctcgctggcccttctccgttgagagatcttgtacatcctcac
tttcaccagaataattttccggaagagtttttcgtgaagaataagcttggcattaaactc
gacaaagatgatcaaatatgtcggctgtcacttacgcccactggatgtcctttaggacca
ctgcactgtcccctaagacacacatcgccgtctgcccaaaattttcagccaccgaaacaa
ctgcccactcatccacgcgaccgagaacgtttggctaccgtttgcaagcattggctacga
gggttgtgtaaaaaaggcgacgcatgtgaatttttgcacgagtataacctaaggcgcatg
ccagagtgttggtggtttgcgaagtatggttattgttctgctggtgatgaatgcctttat
gcccatccaaaggagcgtcgagtagagtgtcctgattataagcgtgggttctgtaaactt
ggtcctacttgtccgcggaagcacgtacggcgagttgcttgccagctctatctcaccgga
atatgccctttaggtccagattgtccgcgtggacaccccaaacctgatttaccatctgcg
agagcttacgagcccccatcaccaccatcgacacgtgaacttggaccaccacctcctgga
tatggtcggtacgccgactttgatcgcgggtttcctggtggtggtggtgggggtgggggt
ggtggccctggtcaagcccatggagctcctgcaggaaacgcgaacgggcctccaaggaga
aacctagacgatgtgctttgctttaagtgcggggaaaagggccattatgcaaatcactgc
aggaatcggaatgtccctggtaaccgtggtggtatggacagatcgtcgaggagatttcct
ggcggggaggagtaa

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