Serpula lacrymans: SERLADRAFT_453661
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Entry
SERLADRAFT_453661 CDS
T03135
Name
(RefSeq) hypothetical protein
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
sla
Serpula lacrymans
Pathway
sla03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sla00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
SERLADRAFT_453661
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sla03021
]
SERLADRAFT_453661
03019 Messenger RNA biogenesis [BR:
sla03019
]
SERLADRAFT_453661
Transcription machinery [BR:
sla03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
SERLADRAFT_453661
Messenger RNA biogenesis [BR:
sla03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
SERLADRAFT_453661
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_2
zf-CCHC
zf-CCHC_3
zf-CCCH_4
zf-CCHC_2
F-box_5
Motif
Other DBs
NCBI-GeneID:
18816945
NCBI-ProteinID:
XP_007323849
JGI:
453661
UniProt:
F8PBS8
LinkDB
All DBs
Position
Unknown
AA seq
304 aa
AA seq
DB search
MSMANPLAGPSPLRDLVHPHFHQNNFPEEFFVKNKLGIKLDKDDQICRLSLTPTGCPLGP
LHCPLRHTSPSAQNFQPPKQLPTHPRDRERLATVCKHWLRGLCKKGDACEFLHEYNLRRM
PECWWFAKYGYCSAGDECLYAHPKERRVECPDYKRGFCKLGPTCPRKHVRRVACQLYLTG
ICPLGPDCPRGHPKPDLPSARAYEPPSPPSTRELGPPPPGYGRYADFDRGFPGGGGGGGG
GGPGQAHGAPAGNANGPPRRNLDDVLCFKCGEKGHYANHCRNRNVPGNRGGMDRSSRRFP
GGEE
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatggctaatccgctcgctggcccttctccgttgagagatcttgtacatcctcac
tttcaccagaataattttccggaagagtttttcgtgaagaataagcttggcattaaactc
gacaaagatgatcaaatatgtcggctgtcacttacgcccactggatgtcctttaggacca
ctgcactgtcccctaagacacacatcgccgtctgcccaaaattttcagccaccgaaacaa
ctgcccactcatccacgcgaccgagaacgtttggctaccgtttgcaagcattggctacga
gggttgtgtaaaaaaggcgacgcatgtgaatttttgcacgagtataacctaaggcgcatg
ccagagtgttggtggtttgcgaagtatggttattgttctgctggtgatgaatgcctttat
gcccatccaaaggagcgtcgagtagagtgtcctgattataagcgtgggttctgtaaactt
ggtcctacttgtccgcggaagcacgtacggcgagttgcttgccagctctatctcaccgga
atatgccctttaggtccagattgtccgcgtggacaccccaaacctgatttaccatctgcg
agagcttacgagcccccatcaccaccatcgacacgtgaacttggaccaccacctcctgga
tatggtcggtacgccgactttgatcgcgggtttcctggtggtggtggtgggggtgggggt
ggtggccctggtcaagcccatggagctcctgcaggaaacgcgaacgggcctccaaggaga
aacctagacgatgtgctttgctttaagtgcggggaaaagggccattatgcaaatcactgc
aggaatcggaatgtccctggtaaccgtggtggtatggacagatcgtcgaggagatttcct
ggcggggaggagtaa
DBGET
integrated database retrieval system