Serpula lacrymans: SERLADRAFT_453892
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Entry
SERLADRAFT_453892 CDS
T03135
Name
(RefSeq) hypothetical protein
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
sla
Serpula lacrymans
Pathway
sla03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
sla00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
SERLADRAFT_453892
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sla03021
]
SERLADRAFT_453892
03036 Chromosome and associated proteins [BR:
sla03036
]
SERLADRAFT_453892
Transcription machinery [BR:
sla03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
SERLADRAFT_453892
Chromosome and associated proteins [BR:
sla03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
SERLADRAFT_453892
RSF complex
SERLADRAFT_453892
WICH complex
SERLADRAFT_453892
B-WICH complex
SERLADRAFT_453892
NORC complex
SERLADRAFT_453892
BRF complex
SERLADRAFT_453892
NuRF complex (fruit fly)
SERLADRAFT_453892
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
HAND
Helicase_C
ResIII
HDA2-3
DEAD
Myb_DNA-binding
DBINO
AAA_14
CHDII_SANT-like
Motif
Other DBs
NCBI-GeneID:
18816963
NCBI-ProteinID:
XP_007324171
JGI:
453892
UniProt:
F8PD98
LinkDB
All DBs
Position
Unknown
AA seq
1049 aa
AA seq
DB search
MDEDILSDVVPSNIVSRQETAERQQKKQKRKVEEGQLQVKRQEMDKAKITDAVKRYSYLL
GQTELFKHFVDIKRARDPEYAAMLDAQPKPKGRGRKKAVDQNARHRKSEREEDEELLKDG
ELAADGNDQPFVFEESPSFISGLMRPYQLQGLNWMVSLHHNGLNGILADEMGLGKTLQTI
SFLSYLKHYRDTSGPHLIVVPKSTLQNWAREFERWTPDVNVVVLTGTKEERAEIIANRLI
PQDFEVCVTSYEICLIEKSALKKFSFEYIVIDEAHRIKNVDSILSQIVRSFLSRGRLLIT
GTPLQNSLKELFALLNFICPEIFSDYADLDSFLHKDDEGAEGEEETSKKVVEALHKILRP
FLLRRVKSDVEKNLLPKKEINIYIGLTEMQRKWYRSVLQKDIDAVNGLTGKKEGKTRLMN
MVMQLRKVTCHPYLFDGAEPGPPYTTDEHIIENSGKMIILDKLLQSMQAKGSRVLIFSQM
SRVLDILEDYCLFRSFKYCRIDGSTAHDDRIVAIDEYNKPDSEKFIFLLTTRAGGLGINL
TTADIVILYDSDWNPQADLQAMDRAHRIGQTKQVYVFRFITEDSVEERMLERAAQKLRLD
QLVIQQGRQQTSKAANKDELLEMITHGADKIINSNDESLINDDIEAIIQRGEERTQELNS
KYEGLNLEDLSNFKSDNSVQQWEGEDFRSGRKALNFNMLSLSKRERKTNYSVDSYFKDTL
RAGPSKTEKAPKIPRAPKQIQIQDFQFFDPALAQLQERELAVHKRLNGIVAVAREAQGPE
DTPEKLETERQAAQEFIDTAEPLTEEEQQQKEEYTERGFFDWSRRDFQQFVRALENFGWT
DNYELLASEIQDKDAKQVKEYYVYFKKHWKELSEHPRIATRIAEGEAKRNKRSNLESLLA
KKIASVHYPMQELELNYPTTKGKVYTEEEDRYLLCRLNHYGMRADDVYERIKKDITEFPV
FRFDWFFKSRSPQELQRRCNTLLGMIEKEAEVKQQEEVKAKGGARGKKRGIDEVQKADKE
KGKDEKVSRSSSPSNTVPAPKKSHKKKKV
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atggacgaggatatccttagcgacgttgttcccagcaatattgtctcgcgtcaggaaact
gctgaacgacaacagaaaaaacaaaagcgcaaggttgaggaaggccaactccaagtaaaa
aggcaagagatggataaggcaaagattacggatgctgtaaaacgttactcttatcttctg
ggtcaaaccgaacttttcaagcatttcgttgatatcaaaagagctcgtgatccagaatat
gctgccatgttggatgctcaacctaaacccaaaggtagagggagaaagaaagcagttgac
caaaatgcacgccatcgtaaatcagaaagagaggaagacgaagaattgctcaaagatggc
gaattagcagcagatggaaacgaccagcctttcgtctttgaagagtcgccgagtttcata
agtggactaatgaggccttatcagctccagggcctcaactggatggtatcattacaccac
aatggattgaatgggatcctggcagatgagatgggcttgggcaaaactcttcagacaata
tcatttttgtcttacctgaaacactatcgtgatacctctggcccgcatctcattgttgta
ccaaagtcaactctccaaaactgggctcgcgagtttgaaagatggacgcctgacgttaat
gtcgttgtccttacaggtactaaagaagagcgcgcagaaattatcgccaatcgtctcata
ccacaggatttcgaagtctgtgtcacttcatatgagatttgtcttatagaaaagtctgca
ctcaagaagttttcattcgaatatatcgtcatcgacgaggcccaccgcatcaaaaacgtc
gactcaatactttcgcaaatcgtgcgctcatttttgtctcgtggacgactcttaattact
ggcacgccattgcaaaacagcttgaaggagctgtttgctttgctcaatttcatttgcccg
gaaattttctccgattatgcggatttggacagcttccttcataaagatgatgaaggggct
gaaggagaggaagagaccagtaaaaaggttgtcgaagctcttcataaaatcttgcgacca
ttcctactgaggagagtgaaatccgacgtagagaaaaatctgttgccaaagaaagagatt
aatatctacattggcttgacggagatgcagaggaaatggtatcgttccgtcttacaaaag
gacattgatgccgtcaatgggctcaccggtaaaaaggaaggaaagactagattaatgaat
atggttatgcagttgcggaaagtgacatgtcatccttatcttttcgatggagcagaaccg
ggtccaccctacaccactgatgaacacattatagagaactctgggaaaatgatcattctg
gataaacttctccaatcaatgcaggcgaagggctccagggttcttatttttagtcagatg
agtcgggtactagatatcttggaggattattgtctattcagaagctttaaatactgtcgt
atcgatggtagtacggcgcatgacgatcgcatagttgctatcgatgaatacaacaaacca
gatagcgagaagttcatcttcctcttgacgactcgtgcaggtggcctggggataaacttg
accactgcagacattgttattttatatgacagtgattggaacccacaagctgatctgcag
gctatggatcgtgctcatcgtattggccagactaagcaggtatacgttttccgattcata
actgaagatagtgtagaagagcgtatgcttgagcgcgcagcacaaaaactgcggctggat
caactagttattcagcaaggtcgacagcaaacttcgaaggctgccaacaaagatgagctg
ttagagatgattactcatggcgccgacaagataattaattcaaacgacgaatcattgata
aatgatgatattgaagctatcattcaacgcggtgaagagcgaacacaagaattgaacagc
aaatatgaaggactcaacctcgaggatcttagtaatttcaagtcagataactctgttcag
cagtgggaaggagaggatttccgctcagggcgcaaagcactgaacttcaacatgttgtct
ctgtccaagcgtgaacgtaaaacgaactattcagtagacagctacttcaaagatacacta
cgtgctggaccctcaaagacggagaaagctcccaagattcctcgtgcacccaaacaaatt
caaatacaagactttcagttctttgatcctgctctcgcccaacttcaggagcgtgaactt
gccgttcataagagattgaatggcatcgttgctgttgctcgggaggcacaaggacctgaa
gataccccagagaaactggagactgaacggcaagccgctcaagagtttatagacactgct
gagcctctaacagaagaagagcagcagcaaaaggaagagtacacagagagaggtttcttt
gactggagtcgacgagatttccaacaattcgttcgcgcactagagaacttcggatggacg
gataattatgaattgctggcttctgaaatccaggataaggacgcaaaacaagtcaaagag
tattatgtctatttcaagaaacattggaaagagttatcagagcaccctaggattgcaaca
cgcattgcggaaggcgaggccaaacgcaacaagcggtctaatctcgaatctcttctggcc
aagaaaatagcctctgtccactatcctatgcaggaactagagctgaattaccctactaca
aagggcaaggtgtacactgaagaagaagatagatatctgctatgtcgactgaatcactat
gggatgcgcgcggatgacgtatatgagaggatcaagaaagatatcacggaattccctgta
ttccggtttgactggttcttcaagagtcggtccccgcaggagcttcaacgaagatgtaat
acattgcttgggatgatcgagaaggaagcagaggtaaagcaacaggaggaggtcaaggct
aaaggtggtgcgagaggaaagaagcgtggcattgatgaagtgcaaaaggccgataaagaa
aaggggaaagacgaaaaggtgtcgcgttcgtcgtctccaagcaacacggtgccagcaccg
aagaaatcgcacaagaagaagaaagtttag
DBGET
integrated database retrieval system
