KEGG   Serpula lacrymans: SERLADRAFT_461625
Entry
SERLADRAFT_461625 CDS       T03135                                 
Name
(RefSeq) hypothetical protein
  KO
K12880  THO complex subunit 3
Organism
sla  Serpula lacrymans
Pathway
sla03013  Nucleocytoplasmic transport
sla03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sla00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    SERLADRAFT_461625
  09122 Translation
   03013 Nucleocytoplasmic transport
    SERLADRAFT_461625
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sla03019]
    SERLADRAFT_461625
   03041 Spliceosome [BR:sla03041]
    SERLADRAFT_461625
Messenger RNA biogenesis [BR:sla03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     SERLADRAFT_461625
Spliceosome [BR:sla03041]
 Complex C
  Other components
   EJC/TREX
    SERLADRAFT_461625
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    SERLADRAFT_461625
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_IFT122_1st Beta-prop_WDR5 WD40_CDC20-Fz WD40_Prp19 WD40 WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_WDR3_1st WD40_Gbeta Beta-prop_Aladin ANAPC4_WD40 Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_2nd WDR55 EIF3I CFAP251_N Beta-prop_EML Beta-prop_WDR19_1st Beta-prop_WDR36-Utp21_2nd WD40_MABP1-WDR62_2nd PD40 Beta-prop_WDR35_TULP_N eIF2A WD40_MABP1-WDR62_1st Beta-prop_EIPR1 Tricorn_2nd Cytochrom_D1 Beta-prop_HPS5 Med14_C DUF7099 tRNA-synt_1d
Other DBs
NCBI-GeneID: 18818253
NCBI-ProteinID: XP_007315809
JGI: 461625
LinkDB
Position
Unknown
AA seq 355 aa
MSNPANGKEEEEIPPPQRPPSPPPHTTFAARGLHAQNFPAHKPRDLRIPSPQAMTHVAWS
CDGKRLAAVGIDKITRIWTPEKSMELRAATHFSGGHSDDVDYVSWNPTHPELFCTSSQKD
RRIVFWDARQSRYTQQVALKVSPVQTNYSPDGKSLLYTSAGHQLFFMTLGKENGAAKEQW
QISDKDGTIVASTAMFNHAGDGVIMTHHSEHTLRIMDYPSLALRESPAAHVGGCVAVALD
PRGRYLASGGYDSIVNMFDLSEWICARTITSCENAINALSFSYDGEYLAIANAGTYIDIC
ATETGAPLHRVPALAPSPTVTWHPSKYVFAYCGQTKLKEGGPPPIAVISLFGGGI
NT seq 1068 nt   +upstreamnt  +downstreamnt
atgtccaacccagcgaacggaaaagaggaagaagagattcctcctcctcagcgcccacct
tcacctcctccgcacacaacttttgcagcgagaggtcttcatgcacaaaactttccagca
cacaaacctcgcgacttacgtataccgtcaccccaggctatgacccatgtagcatggagc
tgcgacgggaaacgactggctgctgtcggtattgacaagataacgcgcatatggactcca
gaaaagagtatggaattacgtgctgccactcatttttcgggcggccattcagacgacgtg
gattacgtgtcgtggaatcccactcaccctgaacttttctgcacttcaagccagaaggac
cgacggatagtattctgggatgcacgacagtctcgatacactcaacaggttgcattgaaa
gtatcaccagttcagacaaattactctccagatggaaaatcactcttgtatacgtctgct
ggccatcaacttttcttcatgactttaggaaaggaaaacggcgcggctaaagagcaatgg
cagatttcggataaagacggcactattgttgcatccacagccatgttcaatcatgctgga
gatggtgttataatgacacatcactcagagcacacgcttcggatcatggactatccctcg
ttagccttacgagaaagcccagctgctcacgtaggtggttgcgtggcggtagcgctggat
cctcgcggaaggtaccttgcatctgggggatatgattcgattgtcaacatgttcgaccta
agtgagtggatatgtgctcgaacaatcacatcttgcgaaaatgccatcaatgccctgagc
ttctcatacgatggcgaatatctggccatcgcaaacgcgggtacatatatcgacatttgt
gcaactgagactggtgctcctctgcaccgtgtgccagccttggcaccttcgccgaccgtg
acatggcatccgtcaaaatatgtattcgcatattgcggtcagacaaaattgaaggagggc
ggacctcctcctatcgcagtgattagtttgtttggtggcggcatttga

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