Serpula lacrymans: SERLADRAFT_465142
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Entry
SERLADRAFT_465142 CDS
T03135
Name
(RefSeq) hypothetical protein
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
sla
Serpula lacrymans
Pathway
sla03022
Basal transcription factors
sla03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sla00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
SERLADRAFT_465142
09124 Replication and repair
03420 Nucleotide excision repair
SERLADRAFT_465142
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sla03021
]
SERLADRAFT_465142
03400 DNA repair and recombination proteins [BR:
sla03400
]
SERLADRAFT_465142
Transcription machinery [BR:
sla03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
SERLADRAFT_465142
DNA repair and recombination proteins [BR:
sla03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
SERLADRAFT_465142
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH_TFIIH
BSD
Motif
Other DBs
NCBI-GeneID:
18818854
NCBI-ProteinID:
XP_007317384
JGI:
465142
UniProt:
F8NUU6
LinkDB
All DBs
Position
Unknown
AA seq
608 aa
AA seq
DB search
MPTNVCTAKASYKKAPGTLELTDTHLQWSQDGKKVPSVRVPYHEATSLFCSKEGAAQVRL
KLGLVNDDNGHNFTFTAPQAVAYSERETFKRELTNIISRNRSTVDSIANPAAAPPPIVAA
SSASPSKAPTPRPPVAVASASRASTSRAPSVSSDRRTPILPGTDAASDFRLRKKVLMGNP
ELASLHRELVMSGQITEAEFWEGREHLLLAESATESQRKGRPGQLVDPRPQTVEGGEIKI
VITPQLVHDIFEEFPVVAKAYNDNVPNKLSEADFWKRYFQSKLFNAHRASIRSSAAQHVV
KEDPIFDKYLEKDDDELEPRRARDEVSDLFINLGATLEDHGETGNERDITMQPGRQRGAL
PLIRKFNEHSERLLNSALGDKPPAKRRRVNGNDGGNDAYGQLDLDDLHDPETSVGIILEM
QDRQRYFEGQMASAAAVEDARKKAFDVRPIFKEARDSLVSWEYNLNQLKLERKPGDAALL
SMTQNVASRLDVKSKKNEMPPDLFIQLTTCQTAANEFLRQFWSAIYPPSTETQTIAPATP
AQKATKAAKMAGYLGKTHEKVDALVRTAQVEGVDSIRVQVAMKPILDAVDHALAFYHTRS
AKPTKGIN
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgcctaccaacgtgtgtacggccaaagcttcctacaagaaagctcctggtacactcgaa
ctcaccgacacacatctgcaatggtcacaggatggaaagaaggttccttcagtgcgagtt
ccttaccatgaggcgacatccctgttctgcagtaaggagggtgctgctcaggtcaggttg
aaactaggtcttgtaaacgatgataacggtcataatttcacgttcactgcccctcaggcg
gtagcatactccgagcgcgagactttcaagagagaacttaccaatataataagtcgcaac
cgtagtacagtcgattcgattgcgaacccagcagcagcccctccccccatagtcgctgct
tcgtcagcctctccttcaaaagctcctacccctagacctcctgttgctgttgcatctgcc
tcgcgagcatccacttcacgtgccccttcagtctctagtgatcgtagaacacccatacta
cctggaacagatgccgccagcgatttccgccttcgcaagaaagtccttatgggcaaccca
gaactcgcatccctgcatcgagagctagtcatgagtggtcagataacagaagctgaattt
tgggagggcagagaacatcttctactagctgaatcagctactgagagtcagagaaaagga
cgtcctggtcaactagtagaccctcgtccacaaaccgtagagggtggtgaaatcaagatt
gtcattaccccacaacttgtacacgacatttttgaagagttccccgtcgtagccaaggca
tacaacgacaatgttccaaataaactgtccgaggcggatttctggaagcgctattttcaa
tccaagctgttcaatgcccaccgtgcatctattcgttcgtcggctgctcagcacgtcgtt
aaagaagacccaatatttgataagtatttggaaaaggatgatgatgagttggagcctcgg
cgtgcaagggacgaggtttccgatctgtttattaatcttggtgccacgctggaggaccat
ggagagactggtaacgaaagggacatcactatgcagccgggtagacagcgtggtgccctt
cccctcattcgaaaattcaacgaacattctgagagattgttaaactctgcattaggtgac
aaacctccagctaagcggcgacgtgtgaatggaaatgatggcggaaacgatgcttatggt
caactagacctcgacgacttgcatgatcccgagacgtcggttggtattattttggaaatg
caagatcgtcagcggtatttcgaaggccagatggcaagtgcagccgctgtggaagatgca
aggaagaaggcctttgatgttcggccaatatttaaggaagcacgagatagtttagtgagc
tgggaatataatctcaaccagcttaagcttgagcgtaaacccggcgatgctgcccttctc
tcaatgacgcaaaacgttgcttcgcgattagatgtaaaatccaagaagaatgaaatgcct
cctgaccttttcatacaactaacgacgtgtcaaaccgctgccaatgaatttttacgtcag
ttctggtctgccatttatcctccctcgacggaaacgcagacgatagctcccgccacacct
gcacagaaggcaacaaaggccgctaaaatggctggctatttgggtaagacacacgaaaaa
gtcgatgctctcgtcagaactgcacaggtagaaggtgtagactcaattcgcgtccaggtc
gcaatgaagcccattcttgacgctgtggaccatgcattagctttttatcacactagaagt
gcaaagcccacaaaagggattaattag
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