Serpula lacrymans: SERLADRAFT_476912
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Entry
SERLADRAFT_476912 CDS
T03135
Name
(RefSeq) hypothetical protein
KO
K12876
RNA-binding protein 8A
Organism
sla
Serpula lacrymans
Pathway
sla03013
Nucleocytoplasmic transport
sla03015
mRNA surveillance pathway
sla03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sla00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
SERLADRAFT_476912
09122 Translation
03013 Nucleocytoplasmic transport
SERLADRAFT_476912
03015 mRNA surveillance pathway
SERLADRAFT_476912
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sla03019
]
SERLADRAFT_476912
03041 Spliceosome [BR:
sla03041
]
SERLADRAFT_476912
Messenger RNA biogenesis [BR:
sla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
SERLADRAFT_476912
Spliceosome [BR:
sla03041
]
Complex C
Other components
EJC/TREX
SERLADRAFT_476912
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_3
Spherulin4
Motif
Other DBs
NCBI-GeneID:
18820896
NCBI-ProteinID:
XP_007322549
JGI:
476912
UniProt:
F8P825
LinkDB
All DBs
Position
Unknown
AA seq
171 aa
AA seq
DB search
MSDDEMNIDEVATGGGAVRRRGRGFQSAAGGNDHTVVTELTYDRVESSHVKDDTRAARSV
EGWIVLVTNVHEEATEEDVTDKFAEFGEIKNLHLNLDRRTGYVKGYALVEYETMSEAQAA
IDGASGTPLLEQEIQCDYAFVRPPPSGPKKGRGAREGRGRSASPSRRRDRD
NT seq
516 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacgatgaaatgaatatcgatgaagttgcgacgggcggtggagccgtgaggcgc
aggggcagaggttttcaaagtgctgcaggcggaaacgaccacacagtcgtgacggaactg
acttacgacagagtggaatcttctcatgtcaaggacgatacgagggcggcgcgttctgtt
gaaggctggattgttctagtcactaacgtccacgaggaagcaacggaggaagatgttacc
gacaagtttgctgagttcggagagatcaaaaacttgcacctcaacctcgaccgacggaca
ggttatgttaagggctatgcgttggtagagtacgagactatgtcagaagcacaggccgcc
atcgatggagcgtcggggactcccctactagaacaggaaatccagtgcgattacgccttc
gttcgacctccgccatctggaccgaaaaagggcagaggagcacgcgagggacgcggacgt
agtgcaagtccgtctcgcagacgtgatagggactga
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