Sphingorhabdus lacus: EUU25_01125
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Entry
EUU25_01125 CDS
T09898
Name
(GenBank) TonB-dependent receptor
KO
K16092
vitamin B12 transporter
Organism
slaa
Sphingorhabdus lacus
Brite
KEGG Orthology (KO) [BR:
slaa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
slaa02000
]
EUU25_01125
Transporters [BR:
slaa02000
]
Other transporters
Pores ion channels [TC:
1
]
EUU25_01125
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
QGY79345
UniProt:
A0A6I6L1N3
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Position
complement(243134..244972)
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AA seq
612 aa
AA seq
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MTLLKFSAAALALLPVPAFAEDDIVVTASGFEQPRSETGQAISVVDAERLAELQSVSISD
ALRTLPGIAVAARGPVGSQSSVFIRGGNSSQTLVLIDGVRINDPSSPNAAFDFGALLTGN
IGRVEVLRGPNSIIWGSQAIGGVINVQSLTPTEDLAARAGLEYGYADSVRASANLSGTSG
IVEGSFGGAFYRTDGISALAGGSEDDGFENWSANGRLKVNLAENVALDFRGYYNRGTIEY
DSPFGAGANALPVSRNRQFVGYVGALFDLADGRLRNRLSYARTDITRIGTDPVVFSFNNF
DVKGTIDRFEYHGSFDIADAATLVFGAEHERTFARTSFEGAPADRARNQVTSGFGQVILR
PIKGLTLTGGVRHDDYSDYGGQTTLGGNIAYTPNDGNTVVRATYGEGFRAPTLSEGQPPF
GNPNLKPETARNFDIGVEHRFLDGKAQVYATYFNRKSTDLIAFSFTTFQSENIDRVNSEG
VELGFALQPTDRLSVQTNYTLTNAINRSVGANFGNRLALRPQHAGSLTVDWQTPWRLKLG
ATLLLSGDSFDNAANTVRLDGYALTHLRAAFPVTDRFELYGRVENVFDTDYVQVAGYNSY
RRNAHVGVRATF
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgacattgctaaaattttcggcagcagcactggcgctgttgcctgtccctgcctttgcg
gaggacgacattgtcgtcacggcaagcggttttgagcaaccccgctctgaaaccgggcaa
gccatatcggtagtggatgccgagcggctggcggagttgcagtccgtcagcatcagcgac
gcgctccggacattgcccggcatcgcggttgcggcgcgcggtccggtgggaagccagagc
agcgttttcattcgcggcggcaacagttcgcagaccttggtgctgatcgacggggtgcgc
atcaacgacccgtccagccccaatgcggcgttcgacttcggtgctttgctgaccggcaat
atcggacgggtcgaggtgctgcgggggccgaattccatcatctggggcagccaggcgatt
ggcggggtcatcaatgtgcagagcctgacgcccaccgaagatctggcagcgcgcgccggg
ctggaatatggctatgccgacagcgttcgtgcatccgccaatctctcgggcacaagcggc
atcgtcgaaggcagctttggcggcgcgttttatcgcaccgacggcatttccgctttggcg
ggaggatccgaggacgacggctttgaaaactggtcggcaaatggccggttgaaggtcaat
ctggccgagaatgtcgcgctggatttccggggttattacaaccgcgggaccatcgaatat
gattcgccctttggcgcaggggcaaatgccctgccggtttcgcgtaaccgtcagtttgta
ggctatgtcggcgcgctgttcgatctggccgacggtcgtttgcgcaaccgcctgtcctat
gcccgcaccgacatcacccgcatcggcaccgatccggtggtgttcagcttcaacaatttt
gatgtgaagggcacgatcgaccgtttcgaatatcatgggtccttcgatatcgccgacgcg
gcaacgcttgtctttggcgccgagcatgaacggacgttcgcgcgcacatccttcgaaggt
gccccggccgaccgcgcccgcaatcaggttaccagcggctttggccaagtcatcctccgg
cccatcaaaggcctgaccctgaccggcggggtgcgtcatgacgactatagcgactatggc
ggccagacgaccttgggcggaaacatagcctacacccccaatgacgggaacaccgtagtg
cgggctacctatggcgaagggttccgcgcccccacattgtcggaaggccagccgcccttt
ggcaaccccaatttgaaacccgaaacagcccgcaatttcgacattggtgtcgagcaccgc
tttctggacggcaaggcccaagtctatgccacctatttcaaccggaaaagcaccgatctg
atcgccttttcattcacgacattccagtcggagaatatcgaccgggtgaacagcgaaggg
gttgaactgggctttgcattacaaccgaccgaccgtctgagcgtgcagacaaactacacc
ctcaccaacgcgatcaaccgttcggtaggcgcgaatttcggcaaccgacttgccctccgg
ccgcaacatgcgggcagcctcacggtcgattggcaaacgccgtggcgcttgaaacttggc
gcgaccttgctgctgtctggcgacagtttcgacaatgcggccaacacggtccggcttgat
ggatatgccctcacccacctgcgcgcagcctttccggtcaccgaccggttcgagctttac
ggcagggtcgagaatgtcttcgataccgattatgtgcaggtggcaggctataacagctat
cgccgcaacgcgcatgtcggcgtccgggcgacattctga
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