Sphingorhabdus lacus: EUU25_01635
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Entry
EUU25_01635 CDS
T09898
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
slaa
Sphingorhabdus lacus
Pathway
slaa03030
DNA replication
slaa03410
Base excision repair
slaa03420
Nucleotide excision repair
slaa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
slaa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EUU25_01635 (polA)
03410 Base excision repair
EUU25_01635 (polA)
03420 Nucleotide excision repair
EUU25_01635 (polA)
03440 Homologous recombination
EUU25_01635 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
slaa03032
]
EUU25_01635 (polA)
03400 DNA repair and recombination proteins [BR:
slaa03400
]
EUU25_01635 (polA)
Enzymes [BR:
slaa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EUU25_01635 (polA)
DNA replication proteins [BR:
slaa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
EUU25_01635 (polA)
DNA repair and recombination proteins [BR:
slaa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
EUU25_01635 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EUU25_01635 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
HHH_5
HHH_2
DprA_N
HHH
DNA_pol_lambd_f
Motif
Other DBs
NCBI-ProteinID:
QGY79436
UniProt:
A0A6I6L648
LinkDB
All DBs
Position
345828..348644
Genome browser
AA seq
938 aa
AA seq
DB search
MSEQKHLYLVDGSAYIFRAYHRLPPLTNIHGEPVGAVYGYTTMLWKLADDLHQADGPTHM
AVVLDKSSQSFRNEIYDLYKANRPEPPEDLRPQFPMIRDATRAFSLPMIEEDNVEADDMI
ASYAKAACAAGWDVTIVSSDKDLMQLVEPCVDMFDTMKNERIRAEEVIGKFGVGPEKVGD
VLALMGDSVDNVPGVPGVGPKTATKLIQEFGDLESVLAAAPDMKPSKMRDNLIEHADKAR
LSKVLVTLKEDCPLPIPIEDMKLGAIPEEPLAAFLQHHGFNSLLKRIGQVANTAAANKAI
AGNPKATSKGDGAASAPVAGKAALPPAMPPIDVNAYECVTTVDRLDHWISRAMETGLVAF
DTETDSLEAVTARLVGFSLAVAPGEACYVPLGHGGTDLLAENPEQIPFAEALARLKLLLV
EPSILKIGQNLKYDISVLAQHGLTIAPYDDTMVMSFALDAGDHGHGMDELARLHLGHECI
SYKSVTGTGKSQIGFAEVPLSDATKYAAEDADVTLRLWHHLKLRLSPDKVTTVYELVDRP
LVPVLSKMECTGIKVDRAVLARLSGEFAAQMESLEKEIHELAGQPFTIGSPQQLGNILFE
KMGHKGGKKGKSGQYSTDVTVLEDLAGQGVEIARKVLDWRQLAKLKSTYTDSLQEQINPK
TGRVHTSYSLVGAQTGRLSSTDPNLQNIPIRTEMGRQIRDAFVAEPGNVILSADYSQIEL
RLAAHFADVAPLRDAFEKGEDIHARTAQEMFGEVNRDTRGRAKTINFSILYGISRWGLAK
RLESTPDEAQALIDAYFKRFPGISNYIQETLATVRECGHSTTLFGRKTWFPRIKSANQAE
RQGSERAAINAPIQGTSADIIKRAMVRMGPALEAAGLPHVKMLLQVHDELVFELPEGDVA
AASKVIEAVMADAAEPLVKLTVPLGVEIGTGTSWGAAH
NT seq
2817 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaacagaagcatctctacctcgtcgatggctccgcctatatcttccgcgcctat
caccgcctgccgccactgaccaatattcatggggaaccggtgggggccgtttacggctac
acaaccatgttgtggaagctcgccgacgatcttcatcaggccgatggcccgacccatatg
gcggtggttctggacaaaagttcgcagtcgttccgcaacgaaatctatgatctctacaag
gccaaccggcccgagccgcccgaagatctgcgcccgcaattcccgatgatccgcgacgcc
acgcgcgccttttcgctgcccatgatcgaggaagacaatgtcgaggcggacgacatgatt
gcaagctatgccaaggcggcgtgtgcagcgggatgggatgtgaccattgtttcgtccgac
aaggacctgatgcagttggtcgaaccgtgcgtcgacatgttcgacaccatgaaaaatgag
cgcatccgcgccgaagaagtgatcgggaagttcggcgtcggacccgaaaaggtcggcgac
gtgctggcgctgatgggcgacagcgtggacaatgtcccgggcgttccgggcgtgggcccg
aagactgcgacgaagttgatccaggaatttggtgaccttgaaagcgtgcttgccgccgcg
cccgatatgaagccgtcgaagatgcgcgacaatctgatcgaacatgccgacaaggcgcgg
ctgtcaaaagtgctggtgacgttgaaagaagattgtccgctgccgatcccgatcgaggac
atgaagctgggagcgattccggaagagcccttggctgcgttcctgcaacatcatggcttc
aactcgcttctgaagcgcatcggccaagtggccaataccgcggcggcaaacaaagcgatt
gcaggtaaccccaaggcgacgagcaaaggggatggtgccgcaagcgcgccggttgccggg
aaagccgcactgccgcctgcaatgccaccaattgatgtgaatgcctatgaatgtgtgacg
acggttgaccggcttgatcactggatttcgcgcgcgatggaaacgggactggtggccttc
gacaccgaaaccgacagtctggaagcggtgacggcgcgccttgtcgggttcagcctagcc
gtggcgccgggggaagcgtgctatgtgccgcttggccatggaggcaccgacctgctcgcc
gaaaatccggagcagattccctttgccgaagcgctggcgcggttgaagcttttgctggtc
gaaccaagcattttgaagatcggccagaatctcaaatatgacatcagcgtattggcgcag
catggcctgacgatcgcgccttatgacgacacgatggtgatgagctttgcactggatgcg
ggcgatcatggccatggcatggacgaactggcgcgtttgcatctggggcatgaatgcatc
agctataaaagtgtgactggcaccggcaaaagccagatcggctttgcggaagtgccgcta
tccgatgcaacaaaatatgcggcggaggatgccgatgttacgttgcgtctgtggcaccat
ctgaaattgcggttgagcccggataaggtgacaacggtctatgaactggtcgaccgtccg
ttggtacctgtcctgtcgaaaatggaatgcaccggtatcaaggtcgaccgcgcggtattg
gcacggctgtcgggcgaatttgccgcgcagatggaaagccttgaaaaggaaatccacgaa
ctggcggggcaacccttcaccattggtagcccgcagcaattgggcaatatcctgtttgag
aaaatggggcacaagggtggcaaaaagggcaagtccgggcaatattcgaccgatgtgacc
gtgctcgaagatctggccgggcagggcgtggaaatcgcacgcaaggtgctcgactggcgg
caattggcgaagctcaaatcaacttataccgacagcttgcaggaacagatcaacccgaaa
acaggtcgcgtccacaccagctattcactggtcggcgcgcagaccgggcggctgtcctcg
accgatcccaatttacagaatattccgatccgcaccgaaatgggccggcagatccgcgat
gcctttgtcgcggaacccggcaatgtcatcctgtcggccgactatagccagatcgagctg
cgccttgccgcacattttgccgatgtagcgcccttgcgggatgcctttgaaaagggtgag
gatattcacgcgcgcaccgcgcaggaaatgtttggcgaggtcaatcgcgacacccgcggc
cgcgccaagaccatcaacttttcgatcctttacggcatttcgcgctggggcctcgccaag
cgcctggaatccacgccggatgaggcacaggccctgatcgacgcctatttcaaacgcttt
ccgggtatctccaactatattcaggaaacgctggcgacggtgcgggagtgtggccattcc
acgactttgttcggccgcaagacatggttcccgcggatcaaatctgccaaccaggcggag
cggcagggaagcgagcgcgctgcaatcaatgcaccgattcaggggacaagcgcggacatt
atcaagcgtgccatggtccgcatgggaccggctttggaggcagcggggctgccccatgta
aagatgctattgcaggtgcatgacgaattggttttcgaactgcccgaaggtgacgtcgcc
gccgccagcaaggtgatcgaggcggtgatggcggatgctgccgaaccgttggtaaagctg
accgtgccactgggcgtggaaatcggaacaggcacaagctggggcgcagcgcattag
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integrated database retrieval system
