Sphingorhabdus lacus: EUU25_02905
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Entry
EUU25_02905 CDS
T09898
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
slaa
Sphingorhabdus lacus
Pathway
slaa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
slaa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EUU25_02905 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slaa03019
]
EUU25_02905 (groL)
03110 Chaperones and folding catalysts [BR:
slaa03110
]
EUU25_02905 (groL)
03029 Mitochondrial biogenesis [BR:
slaa03029
]
EUU25_02905 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
slaa04147
]
EUU25_02905 (groL)
Enzymes [BR:
slaa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
EUU25_02905 (groL)
Messenger RNA biogenesis [BR:
slaa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
EUU25_02905 (groL)
Chaperones and folding catalysts [BR:
slaa03110
]
Heat shock proteins
HSP60 / Chaperonin
EUU25_02905 (groL)
Mitochondrial biogenesis [BR:
slaa03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
EUU25_02905 (groL)
Exosome [BR:
slaa04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
EUU25_02905 (groL)
Exosomal proteins of other body fluids (saliva and urine)
EUU25_02905 (groL)
Exosomal proteins of breast cancer cells
EUU25_02905 (groL)
Exosomal proteins of colorectal cancer cells
EUU25_02905 (groL)
Exosomal proteins of bladder cancer cells
EUU25_02905 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
QGY79653
UniProt:
A0A6I6LBN4
LinkDB
All DBs
Position
638373..640019
Genome browser
AA seq
548 aa
AA seq
DB search
MAAKDVKFGRDARERILRGVDILADAVKVTLGPKGRNVVIDKSFGAPRITKDGVTVAKEI
ELKDKFENMGAQMIREVASKANDAAGDGTTTATVLAQAIVREGMKSVAAGMNPMDLKRGV
DLAVTKVVEDLKSRSKPVTGSAEIAQVGIISANGDIEVGEKIAEAMDKVGKEGVITVEEA
KGLEFELDVVEGMQFDRGYLSPYFITNTEKMSVELENPYILIHEKKLSNLQAMLPILEAV
VQSGRPLLIIAEDVEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLEDIAILTKGEM
ISEDLGIKLESVTIGMLGQAKRVTIDKDNTTIVDGSGDAEAIKGRVEAIRAQIETTTSDY
DREKLQERLAKLAGGVAVIKVGGATEVEVKERKDRVDDALHATRAAVEEGIVPGGGTALL
YATKALDGLKGANDDQTRGIDIVRKAIEAPLRQIAQNAGHDGAVVAGNLLRVGDQNQGFN
AATDTYENLVAAGVVDPTKVVRTALQDAASVAGLLITTEATISDAPEDKAPAMGGMPGGM
GGMGGMDF
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggctgctaaagacgtgaaattcggccgcgatgcgcgtgaacgcatcctgcgcggcgta
gacatccttgccgatgccgtaaaagttacgctcggccccaaaggtcggaacgttgttatc
gacaaaagcttcggcgctcctcgcatcactaaggacggcgttactgtcgccaaggaaatc
gaactgaaagacaagttcgaaaatatgggcgcacagatgatccgcgaagtggcctccaag
gctaatgatgctgctggtgatggcaccacgacggcgactgtgcttgcacaagctatcgtt
cgcgaaggcatgaagtcggttgcggctggcatgaacccgatggatctgaagcgcggcgtc
gacctcgccgtgaccaaggttgttgaagacctcaagtcgcgttcgaagcccgttaccggt
tcggcagaaatcgcccaagttggtatcatttcagccaatggtgacatcgaagtaggcgag
aaaatcgctgaagcaatggacaaggttggcaaggaaggcgttatcaccgtcgaagaagcc
aagggcctcgagtttgaactcgatgtcgtggaaggcatgcagtttgaccgcggttatctg
tcgccttacttcatcaccaacaccgaaaaaatgtcggtcgagttggaaaatccctacatt
ttgatccacgaaaagaagctcagcaatctgcaagccatgttgccgatcctcgaagccgtt
gttcagtcgggtcgtccattgctgatcatcgctgaagacgtcgaaggcgaagctcttgca
accctcgtcgtcaacaagcttcgcggcggtctgaagatcgccgccgttaaggctcctggc
tttggtgatcgtcgtaaggcgatgcttgaagatatcgcgatcctcaccaagggtgaaatg
atcagcgaagatttgggcatcaagcttgagtcggtcacgattggaatgctcggccaagcc
aagcgggtcaccatcgataaggacaacacgaccatcgtagatggttcgggtgatgccgaa
gcgatcaaaggccgcgtagaagctatccgcgcgcagatcgaaaccaccaccagcgactat
gaccgtgaaaagctgcaagaacgtttggcaaagcttgccggcggtgttgctgtaatcaag
gtcggcggcgcaaccgaagttgaagttaaggagcgtaaggatcgggttgacgatgcgctt
catgcaactcgcgctgcggttgaagaaggcatcgttcctggcggcggcacagctttgcta
tacgccaccaaggctcttgacggcctgaagggcgcaaacgacgaccagacccgtggtatc
gacattgttcgcaaggcgattgaagctccgttgcgtcagatcgcgcaaaatgcgggccat
gatggcgctgttgttgctggcaacttgctacgcgtcggtgaccagaaccagggcttcaac
gctgcaaccgatacctatgaaaatctggtagcggctggtgttgttgacccgaccaaggtt
gtgcgtactgctctgcaagatgccgcttcggttgctggcttgttgatcaccaccgaagcg
accatttcggacgctcctgaagataaggcaccagccatgggcggcatgcccggtggtatg
ggcggcatgggtggcatggacttctaa
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integrated database retrieval system
