Sphingorhabdus lacus: EUU25_03125
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Entry
EUU25_03125 CDS
T09898
Symbol
miaB
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
slaa
Sphingorhabdus lacus
Brite
KEGG Orthology (KO) [BR:
slaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
slaa03016
]
EUU25_03125 (miaB)
Enzymes [BR:
slaa01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
EUU25_03125 (miaB)
Transfer RNA biogenesis [BR:
slaa03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
EUU25_03125 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
Motif
Other DBs
NCBI-ProteinID:
QGY79691
UniProt:
A0A6I6L622
LinkDB
All DBs
Position
complement(683320..684660)
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AA seq
446 aa
AA seq
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MSTKSPKTYSIKNYGCQMNVYDGERMAELFDAQGMIAADDKNDADIVVLNTCHIREKAAE
KVYSEIGRLGKTSRAEGGPMIAVAGCVAQAEGSEISRRAPTVDIVVGPQAYHNLPQMIAD
VTQGKRAVDLDLPGLDKFSQLPPKRKTGASAFLTVQEGCDKFCTYCVVPYTRGAEVSRSW
SALLDEAKALVDSGAKEITLLGQNVNAWSGEDDKGQMQGLDGLIRALDRIDGVRRIRYMT
SHPNDMTDGLIAAHGDVEKLMPFLHLPVQAGSDRILKAMNRSHSRDSYLRILDRVRTVRP
DVALSGDFIVGFPGESDADFEDTMSLVRAVGYAQAFSFKYSPRPGTPAADMADQIPTSVM
DDRLQQLQAQLMADQTAFNTQTEGKICEVLLERPGKLPGQLIGKSPWLQSVHVLAPGLTI
GDIVTVTMSESGPLSLKGDPIMRAAA
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgagtaccaaatcgcctaaaacctattcgatcaaaaactacggctgccagatgaacgtc
tatgatggcgaacgcatggccgagttgtttgatgcccaaggcatgattgctgccgacgac
aaaaatgacgctgacatcgtcgttctgaatacgtgccacatccgcgaaaaggcagcggag
aaagtctattcagaaataggtcgcctcggaaaaacgagccgcgccgaaggtggaccgatg
attgccgttgctggatgtgttgcgcaagccgaaggcagcgaaatcagccgtcgcgcaccc
acggtcgatatcgttgtaggaccgcaagcctatcacaacctgcctcagatgatcgccgat
gtgacccagggcaagcgcgcggtcgacctggacctgccgggtctcgacaaattttcgcaa
ttacctcccaagcgcaagacaggcgcttcggcattcctgacggtgcaggaaggctgcgat
aaattctgcacctattgcgtcgtgccttacacgaggggagcggaggtttcacgcagttgg
agcgccttgttggatgaagccaaggcgttggtggacagcggtgcgaaggaaatcacattg
cttggccagaatgtaaatgcctggtcgggcgaggatgacaaaggacagatgcaaggactc
gacggcctgatccgcgcactcgaccggatcgacggcgtacgccgcatacgctatatgacc
agccaccccaacgacatgaccgacgggttgattgctgcgcatggcgatgtcgaaaaactg
atgccgttccttcacctaccggtgcaagcagggtcggatcgcattttgaaagccatgaac
cgcagccatagccgcgacagctatttgcgaattttggaccgtgtccggacagtgcgtcca
gatgtcgccctgtcgggcgactttatcgtcggatttccgggcgagagcgatgccgacttc
gaagatacaatgagccttgtccgcgccgtcggttatgcacaggcattctcgttcaaatac
agcccccgccccgggacgcctgccgccgatatggcagaccagatcccgacatccgttatg
gatgatcggcttcaacagttgcaggcgcaactgatggcagaccagaccgcgtttaacaca
cagaccgagggtaaaatctgcgaagtcttgctggagcgccccggaaaattgcccggacag
ctaatcggtaaatccccatggctgcaatccgtgcatgtgcttgcgccggggctaactatc
ggtgatattgtcaccgttacgatgagtgagtctggaccactaagtttgaaaggcgatccg
ataatgagagcagcagcctga
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