Sphingorhabdus lacus: EUU25_03340
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Entry
EUU25_03340 CDS
T09898
Symbol
bamA
Name
(GenBank) outer membrane protein assembly factor BamA
KO
K07277
outer membrane protein insertion porin family
Organism
slaa
Sphingorhabdus lacus
Brite
KEGG Orthology (KO) [BR:
slaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
slaa03029
]
EUU25_03340 (bamA)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
slaa02000
]
EUU25_03340 (bamA)
Mitochondrial biogenesis [BR:
slaa03029
]
Mitochondrial protein import machinery
Outer membrane
TOB/SAM complex
EUU25_03340 (bamA)
Transporters [BR:
slaa02000
]
Other transporters
Pores ion channels [TC:
1
]
EUU25_03340 (bamA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Omp85
POTRA
POTRA_1
Motif
Other DBs
NCBI-ProteinID:
QGY79732
UniProt:
A0A6I6LB58
LinkDB
All DBs
Position
720975..723674
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AA seq
899 aa
AA seq
DB search
MNFKALGIYLMGSTALAATGTMTLVTPAFAQGTPAAAQPAPVVQAEQIQSITVVGTQRLE
ADTVRSYMRLRVGQNWSQVAADQALKDLYATELFADVAIRNNSGAVVVEVRENPVVNRII
LEGNKRLKNDKIEPEIKLAPRQIYSRSKVRADVARIVELYKRQGRFAATIEPKLVQLDQN
RVDIVFEITEGPKSKVQQINIIGNDKFSDDRLRGEMVTKQARFYRFFSSGTSYDPDRLAF
DQQKLRQFYLTQGFADFRVVSAVAELTPDKQDFIITYVVEEGDRYKFGDVKVESQIRDFD
SEKLTATLRMKKGDWYDAKMVEDTVESLSETAGLFGYAFADVNPNFNRDKETLTMGITFD
VAESQRVFVERIDINGNTLTQDKVVRREFRLNEGDAFNSIQVKRTADRIKSLGYFQEDLE
VEQAQGSAPDRIVLTTNVEEKATGELSLSAGFSSIENFIFQGSIKQRNFRGLGQELRTNI
SYSSYSKSAEIGFTEPYLFDRSIAISGDIFRRDLNSFNFFNNQRNTTYEQATTGAQIRVG
VPINEFLYFQGRYGISQDDISLDRNQFFTDPDGTGPLPSACDPVIAGRFLCDAIGNRLTS
SVGYTLLYDNRDNRIRPTRGQSFGISQDFAGLGGSVKYIKTRVNADKYWRLFGTNFILGL
SAEGGYIHPLENRGSKALGIDDIRLTDRFYLGEPQMRGFDIRGIGPRVQRVTFNAELQNG
VVVNVPVLERNRIQDDAIGGRFYYLGRAEVQIPLGSGAKELGLRPSVFMDVGSVFGVTKP
LLQTVPRREVLPDLSAGAPLFYTGAFVVNPPTTPGGTPITTTTLETSTIATNPDGSARTP
ALQFEERFLGDTWKPRLSVGFGVNWNSPFGPFRIDIARALLKETGDDTKLFTFNVGTQF
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
atgaatttcaaagctctcggcatatatttgatggggtccaccgctttggcggcgaccgga
actatgacgctggtcacgcctgcatttgctcaaggcacgcccgcagcggctcagcctgcg
cccgtggttcaggccgaacagatccagtcgataacggtggtagggacacagcgtctcgaa
gccgataccgtgcgttcttatatgcgtttgagggttggccaaaattggagccaggtggcc
gctgaccaagcgctaaaggacctgtacgcgaccgaattatttgccgacgtggcaatccgc
aacaacagcggcgcggttgttgttgaagtacgtgaaaaccccgttgtgaaccgcattatc
ctcgaaggaaacaagcggctcaagaacgacaagattgagcccgaaatcaagctcgcaccg
cgccagatttattcacggtccaaggtgcgtgccgatgtggcgcgtatcgttgagctgtac
aagcggcaaggtcgctttgcggccacgattgaacccaagctggtccagctcgatcagaat
cgcgttgatatcgtttttgaaattacggaagggcccaagtccaaggttcagcaaatcaac
atcatcggtaacgacaaattctccgatgaccgccttcgcggcgaaatggtgacgaaacaa
gcgcgtttttaccgcttcttcagctcgggcaccagctacgaccctgatcgtctcgccttc
gaccagcagaaactgcgtcaattctacctgacgcaaggctttgccgatttccgtgtggtc
tctgccgttgctgaactgaccccggacaagcaggacttcatcatcacctatgtggtcgaa
gaaggtgaccgctataagtttggcgatgtgaaggtcgaaagccagatccgcgatttcgac
tccgaaaagctcacggccacgcttcgcatgaaaaagggcgattggtacgatgcgaagatg
gtcgaagacacggtggaaagcctgtctgaaaccgccggactgtttggctatgcttttgcc
gatgtgaaccccaactttaaccgcgacaaagaaacgctcaccatgggcattacctttgac
gttgcggaaagccagcgcgtgttcgtcgagcgtatcgatattaacggcaatacgctgacg
caggacaaggttgtgcgccgcgaattccgtctgaatgaaggagatgctttcaacagcatc
caagttaagcgtaccgcggaccgtatcaagtcgttgggctattttcaggaagatttggaa
gtcgaacaggcacaaggcagcgcgcccgaccggatcgtgctcaccaccaatgttgaggaa
aaggcgaccggcgaactgtcgctatccgctggcttctcctcgatcgaaaacttcattttc
caaggctcgatcaagcagcggaacttccgtggtttgggtcaggaactgcggacgaatatt
tcctattcatcctattccaagtctgcagaaattggcttcaccgagccctatctatttgac
cgctcgattgcgatttccggcgatatcttccgccgcgatctcaatagcttcaacttcttt
aataaccaacgcaataccacctacgaacaagcgaccaccggtgcgcaaattcgtgttggt
gttccgattaacgaattcctgtatttccaagggcgctatggcatcagccaagacgatatt
tcgctcgatcggaaccagttcttcactgatccagacggcaccggcccgttaccttcagcc
tgtgaccccgttatcgcaggacgcttcttgtgtgatgctatcggtaaccgtctgacctca
tcggtcggctataccctgctgtacgataaccgagataaccgcatccgaccgacccgtggc
caaagtttcggcatcagccaagatttcgctggcctggggggcagtgtaaaatatatcaaa
acgcgtgtaaatgctgataaatattggcgattgtttggcacgaacttcattctggggctt
tcggcagaaggtggttacatccacccgctggaaaatcgcggatcgaaggcgctgggtatt
gacgatattcgtcttaccgaccgtttctatctcggtgaaccgcaaatgcgcggctttgat
attcgcggcattggacctcgtgtgcagcgagttacgttcaatgctgagttgcagaatggc
gtagtagttaacgtgcctgttctggagcgcaaccgcatccaggatgacgcgatcggtggc
cgtttctattatcttggccgtgccgaggtccagattccgctgggtagcggtgcgaaagaa
ctggggctccgtccttcggtgtttatggatgtcgggtctgtatttggcgtaacgaagccg
cttcttcaaacagttccacggcgcgaagttttacccgacctctctgcgggcgcgccgttg
ttctacaccggggcatttgtggtgaacccgccgacaacccctggcgggacgcctataacg
acgacgacgttggaaaccagcacaatagcaactaatcccgacggttcggcacgcacgcca
gcccttcagtttgaagagcgcttcctcggtgatacgtggaaaccccgtctgtcggtcggt
ttcggcgtaaactggaactccccatttggtccgttcaggatcgacatagcccgcgcatta
ttaaaagagacgggcgacgataccaaattatttacattcaacgtagggactcaattctaa
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