Sphingorhabdus lacus: EUU25_03505
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Entry
EUU25_03505 CDS
T09898
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
slaa
Sphingorhabdus lacus
Pathway
slaa03420
Nucleotide excision repair
slaa03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
slaa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EUU25_03505
03430 Mismatch repair
EUU25_03505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
slaa03400
]
EUU25_03505
Enzymes [BR:
slaa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EUU25_03505
DNA repair and recombination proteins [BR:
slaa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EUU25_03505
MMR (mismatch excision repair)
Other MMR factors
EUU25_03505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_12
PcrA_UvrD_tudor
AAA_11
Motif
Other DBs
NCBI-ProteinID:
QGY79760
UniProt:
A0A6I6L268
LinkDB
All DBs
Position
complement(754390..756678)
Genome browser
AA seq
762 aa
AA seq
DB search
MPEASPQIDPPWLNGLNAPQREAVLTTEGPVLLLAGAGTGKTAALTARMAQILYTRLAWP
SEILAVTFTNKAAREMRERIGAMVGEAVEGMPWLGTFHSIGAKLLRRHAEVIGLQSNFTI
IDTDDQIRLLKQLIQSEDLDEKRFPARGLAALLDKWKNAGKSPSDLDAADNEAYANGKGQ
RMYALYQARLLALNACDFGDLLLHGLNLLKNNRDILEKYQAQFKYILVDEYQDTNAVQYL
WLRLLAQKRKNICCVGDDDQSIYSWRGAEVANILRFEKDFPGAKIIKLEQNYRSTPHILA
AASGLIDANSARLGKTLWTELDEGEKVRIIGVWDGPEEARRVGEEIESLQYKGESLDSVA
ILVRAQHQTREFEDRFIQIGMNYRIVGGFRFYERAEIRDAIAYLRIVNQPADDLAFERIV
NVPKRGIGDKAVEKIHIVARADQTPLSVAATRLVGTDELSGKARKSLADLVVDIARWRDE
ASRMTPADLTRLILDESGYTAVLQAERSVEASGRLENLNELARAMEEYETLGEFLEHVSL
VMDNDRGDPGASVTIMTIHAAKGLEYDNIFLVGWEDGIFPSQRALDEGGLASLEEERRLA
YVAITRARRKCTIIHAANRRIYGQWTSSIPSRFIEELPLDHIEAEQTMTGGASLWRANWS
EQADPFAHLAASNQGRSNARGPGWQRAATSGGFNPRPQRIAENTRSAVSLGNKGRSDLSV
AMRVFHEKFGYGTIAEIEGNKLEIDFEVAGRKRVMDSFISIA
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaagctagcccccaaattgatccgccgtggttgaatggccttaatgctccacaa
cgtgaagctgtgctgacgaccgaaggcccagtcctcctgttggccggtgcgggcaccggc
aagactgctgccttaactgcgcgtatggcgcagatactgtacacgcggttggcgtggccg
tcagagatattggccgtgaccttcaccaacaaggcagcgcgcgagatgcgtgaacggatt
ggtgcgatggtaggcgaggcagttgagggtatgccttggctcggaacgttccacagcatc
ggtgccaaactgctccgccgtcatgccgaggttatcggcttgcagagcaatttcaccatc
atcgacaccgacgaccaaatccgccttttaaagcagttgatccagtccgaagaccttgat
gaaaaacgtttccctgcccgcggccttgcggctttgctcgacaagtggaaaaacgccgga
aaatcgccatcggacctcgatgcagccgacaatgaagcctatgccaatggtaagggacag
cggatgtacgcgctgtatcaggctcggcttctggccctaaatgcctgcgacttcggggat
ttgttgctacatggtttgaacctgctcaagaacaatcgcgatattcttgagaaatatcag
gcgcagttcaaatatatacttgtggacgaatatcaggacacgaacgcagtccaatatctc
tggctgcgtctgctcgcgcaaaagcgaaagaatatctgctgcgtcggtgatgacgaccaa
agcatctattcctggcgcggagcggaagttgcaaatatcctgcgcttcgaaaaggacttt
ccgggcgcgaagatcatcaagcttgagcaaaactaccgcagcacgccgcatatccttgcc
gcggccagcggcctgatcgacgccaacagcgcgcgtctgggcaaaactttgtggaccgaa
ctggatgaaggcgaaaaggtccgcatcatcggcgtgtgggatggtcctgaagaagcacgg
cgtgtcggtgaggagatcgaaagcctgcaatataagggcgagagcctcgacagcgtcgcc
atcctcgtccgcgcccagcaccagacccgcgaatttgaagaccgcttcatccagatcggc
atgaactatcgcatagtcggcggtttccgtttttacgaacgtgccgaaatccgtgatgcc
atcgcctatttgcggatagtcaaccaacccgccgacgacctcgcctttgaacgcatcgtc
aacgtccccaaacgcggcattggggataaggctgtggaaaagatccacatcgtcgcccgc
gcggaccaaactccacttagcgttgccgccacccgactggtcggaacggacgaactttcc
ggcaaagcgcgcaaatcgctcgccgaccttgtcgtcgacatcgcccgctggcgggacgag
gcatcgcgcatgaccccagctgacctgacgcgcctaatcttggacgaaagcggctatacc
gccgtgttgcaggccgaacgtagcgtggaagcatcaggacggcttgaaaacctgaacgaa
cttgcgcgcgcaatggaggaatatgaaaccctgggcgagtttctggaacatgtcagtctg
gtcatggacaatgaccgcggcgacccgggtgccagtgtaacgatcatgacgatccacgca
gctaaaggccttgaatatgacaatatattcctggtcggttgggaagacggcatttttcct
tcgcagcgcgccttggatgaaggcggactagcctcattggaagaggagcgccgcctggcc
tatgtcgcgatcacccgtgcccggcgtaaatgcacgatcatccatgccgccaaccgccgc
atctatggtcaatggacgtcgagcattccgagccggtttatcgaagaactgccgctcgat
catatagaggccgaacagacgatgaccggcggagcgtcgctgtggcgcgccaattggtcc
gaacaggccgatcccttcgctcatctcgcggcctccaaccaaggccgcagcaacgcgcgc
ggccccggatggcagcgcgccgcgaccagcggtggcttcaacccccgcccgcaacgtatc
gccgaaaacacgcgtagtgcagtcagcttgggcaataaggggcgcagtgacctctccgta
gccatgcgcgtgttccatgaaaagttcggctacggcacgatcgcagagatcgagggcaac
aagctggaaatcgattttgaggtcgcaggtcgcaagcgcgtaatggatagtttcatttcc
atcgcctga
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