Sphingorhabdus lacus: EUU25_04640
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Entry
EUU25_04640 CDS
T09898
Symbol
prsR
Name
(GenBank) PEP-CTERM-box response regulator transcription factor
KO
K02481
two-component system, NtrC family, response regulator
Organism
slaa
Sphingorhabdus lacus
Brite
KEGG Orthology (KO) [BR:
slaa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
slaa02022
]
EUU25_04640 (prsR)
Two-component system [BR:
slaa02022
]
NtrC family
Unclassified
EUU25_04640 (prsR)
BRITE hierarchy
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
Response_reg
HTH_8
AAA_5
Mg_chelatase
AAA
HTH_28
HTH_29
HTH_23
AAA_2
HTH_17
Xre-like-HTH
AAA_16
HTH_1
HTH_37
HTH_22
HTH_30
AAA_7
HTH_50
Motif
Other DBs
NCBI-ProteinID:
QGY79964
LinkDB
All DBs
Position
complement(1001449..1002810)
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AA seq
453 aa
AA seq
DB search
MMDVRQKLLIVEDDLGLQKQLKWSYEDFDVYCASNRDEAMALLRSEEPDVVTLDLGLPPD
PDGVTEGFAVLDEMLKLKPDTKVIVASGHGAKESALRAISAGAWDFYQKPVDIDELHLIV
KRAFHVRSLEMQNELLQQPDADGELLLGSIISGSPEMVKVARTIERVAPTGVSVMLLGAS
GTGKELLARGLHNASNRADKPFIAINCGAIPENLLESELFGHEKGAFTGAVKTTEGKIEI
ANGGTLFLDEVGDIPLPLQVKLLRFLQERTIERIGGRKPIPVDVRVVCATHRNLNQMIVD
QSFREDLYYRLAEVTVAIPSLIERSGDAVLLAKYFVSRFAREMNPSIKGMSTSALTAIDH
WTWPGNVRELENRVKRAVIMADGKFVTADDLDFGDEDEDELLLNLKAAREAADRKAIKRA
IARTEGNISGAAKLLGISRPTLYDLLKQYDLQV
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgatggacgtgcgccagaaattgctcattgtcgaagacgatctcgggctgcagaagcag
ttgaaatggtcgtatgaggattttgatgtctattgtgcctccaatcgtgacgaggccatg
gctttgttgcggtcggaagaaccggatgtcgtaacactcgacctcggcctgccgcctgat
ccggatggcgtgaccgaaggtttcgccgtgcttgatgaaatgctaaagctgaaaccggat
accaaagtcattgtggcgtcaggccatggggcaaaggaaagtgccttgcgcgccatatcg
gcgggagcatgggatttttaccagaagcccgtcgatattgatgagctgcacctgatcgtc
aaacgcgctttccatgtgcgcagtctggaaatgcagaacgagcttttgcagcaacccgat
gccgatggcgaattgctgctcggctccatcatttcgggatcgcccgagatggtgaaggtc
gcccgcaccattgaacgcgtcgcgccgaccggtgtgtcggtcatgctgctgggagccagt
gggacgggtaaggaattgctcgcccgtggtctgcacaatgcgagcaaccgcgccgacaaa
cccttcattgcgatcaactgcggtgcaatcccggagaatctgctcgaatccgaattgttc
ggtcatgaaaaaggcgccttcaccggggctgtcaaaaccaccgaaggcaagatcgaaatt
gccaatggcggcacgcttttcctcgatgaagtcggcgacatcccgctgcctttgcaggtc
aaactgctccgctttttgcaggaacgcaccatcgaacgcatcgggggacgaaagccgata
cccgttgacgtgcgcgtggtgtgcgccacgcatcgtaacctcaaccagatgatcgtggat
caaagcttccgcgaagacctttattatcgcttggcagaggtcacggttgctattccaagc
ctgatcgaacggtcgggcgacgcggtgttgctagcgaaatattttgtcagccgctttgca
cgcgaaatgaacccgtcgatcaagggcatgtcgaccagcgctctgaccgccatcgaccat
tggacatggccgggcaatgtgcgcgaactggaaaaccgggtgaagcgcgcagtcattatg
gcagacgggaaatttgttaccgcagacgatctcgatttcggcgatgaagacgaggacgaa
ttgttgctgaacctgaaggcggcgcgcgaagctgcggaccggaaagcaataaagcgcgcg
atcgcccgtacggaagggaatatttcgggggctgcaaagctgctcgggatcagccgtccg
actttatacgatcttctcaagcaatacgacctacaggtctga
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