Sphingorhabdus lacus: EUU25_05125
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Entry
EUU25_05125 CDS
T09898
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
slaa
Sphingorhabdus lacus
Brite
KEGG Orthology (KO) [BR:
slaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
slaa03400
]
EUU25_05125
Enzymes [BR:
slaa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EUU25_05125
DNA repair and recombination proteins [BR:
slaa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
EUU25_05125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
AAA_lid_4
Motif
Other DBs
NCBI-ProteinID:
QGY80049
UniProt:
A0A6I6L3J5
LinkDB
All DBs
Position
complement(1110847..1113822)
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AA seq
991 aa
AA seq
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MPSAEPAHRATRVFTVPLGSDFCDATVGFVLANCGDDPLGITRMTLLLPNNRAIKAMTEA
FVRTVSPGLLLPKMVAIGDLALDEALGPILDPLSDDDVVWPVISPASRILLLADLVVKNR
PTGQSVTAAESLRLARKLAEMIDELEIEQVDFERLKSLEAVAELPEHWLSAYGQISEIIP
AYRTELANRKLLGPAERRNILLGRLEQRLRENPPSSPLIAAGITTSAIAVSNLLRRVARL
PNGSVILPGVDLNMPEADWDALRPPKSEDGVSKPRRNAEVHPQFHLRLLLDRMAIARDEV
ATISSGAAPAMADSITDIFCVPERSTHWRELPPNRKKLAHVRLIEADDSAQEAKIIAVHI
RQRLEHPGQRTALITPDREIAARVTSQLRRWGISVDDSAGKPLLQSPEGALFLGLANAVA
RRFAATDILEIAKHPLVRMKMDRLEWLNQARSLDARMRGPSVGVGIFAFADEIAKAADDA
LNLWWTDYSAQLSALDDGAKGGLVAALDALKTVADTLTDGQIWKGTAGRELARALAELGE
CNLSAIPMDDSSALPAIITELLSGAVVRPPYGGHPRVAIYGLLEARLQQADLVICAGLNE
TVWPQIAQPDPWLASAIRRHLGLATLDRNVGLSAHDLATALGAKDVVLTRARRDRGGPGV
ASRFLLRMRAYLGEALQQDATTPQLAALLDDAPKKLDFAPRPKPMPAAEQRRVRISVTDF
DQLKSDPYSFYAKRVLRLRPMDPVDAEPDHKWRGILVHDILEKWFRDDKCAPEKLVARAE
ALLTNGALDPILRTLWQPRIADGLRWIAEQTQKLRDEDGRQLLIAEEKGSFELSGITITG
RADRIDAAADGSLIIMDYKTGGSPKPKQINAGFALQLGLIGLMAERGAIKGVRGEALGFE
YWSLGKDQKRGAFGYIAHATATKASDKKKAADEFVTFIAGQAEEALNMWILGEAPFTAKL
HPEYSNYADYDHLMRLQEWDGRQSIAEADGA
NT seq
2976 nt
NT seq
+upstream
nt +downstream
nt
atgcccagcgctgaacccgcacatcgggcgacacgcgtcttcacggttcctctcggctcg
gatttttgcgacgcgacggtcggatttgttctggcgaactgcggcgatgatccgcttggc
ataacgcggatgacgctgctgttgccgaacaaccgcgcgatcaaggcgatgaccgaagcc
tttgtgcgcacggtttcgccgggattgctgctgccgaaaatggtggcgattggtgacctc
gcactggacgaagcattggggccaattttggacccgctgtcggacgatgatgtcgtatgg
ccggttatcagccctgccagccgcatcctgttgttggccgatctggttgtaaagaaccgt
ccaacagggcaatcggtcaccgcggcagaatccctgcggcttgcgcgcaaattggcggaa
atgatcgacgagctggaaatcgagcaggtcgattttgaacggctcaagtccctagaggcg
gtagctgaactgcccgaacattggctcagcgcatacgggcagatcagcgaaattatccct
gcctaccgaaccgagcttgccaatcgaaagcttctgggccctgccgaacgcaggaatatt
ttgctgggcaggctcgaacagcgtttgcgcgaaaatccgccgtcttcgcccctgattgcc
gcggggataacaacatcggctatcgcggtgtccaatctgttgcgccgtgttgcccgcctt
ccgaacgggtcggtgatcctgccaggcgttgacctgaatatgcctgaggcagattgggat
gcgctgcgtccaccgaagagcgaggatggtgtttccaagccccgtcgcaatgccgaagtg
catccgcaattccatctacgcctgttgcttgatcgcatggcgattgcgcgggacgaagtt
gcaacgatttcatccggtgcagcgcccgcaatggccgacagcatcaccgatattttctgc
gttcccgaacgaagcacgcattggcgtgaacttccgcccaaccggaaaaaattggcgcat
gtacgcctgatcgaagccgacgatagcgcgcaggaagcaaaaatcattgccgtccatatt
cggcaaaggctcgaacaccctggacaacgcacggcattgattacccccgatcgtgaaatt
gccgcacgggtaacatcacagctgcgtcgctggggcatttccgtcgatgacagtgcgggc
aagcctttgctgcagtcgcccgagggggccttgtttctggggctggctaatgccgtggca
cgacgttttgcggcgaccgacatattggagatcgcgaagcatccgcttgtccgaatgaaa
atggaccgtctggaatggctaaatcaggcgcgctctctcgatgcccgtatgcgtgggcca
agtgtcggcgtcggcatttttgcttttgcggatgaaattgccaaggcggcggatgacgcg
ttgaacctgtggtggacggactatagcgctcagctctcagcgttggacgatggtgcaaag
ggcgggctggtcgctgcgctcgacgccctgaagacggtcgccgacacgttgacggacggc
cagatctggaaaggtaccgcaggccgggagctggcgagggccttggccgaattgggtgag
tgcaacctgtccgccattcccatggacgatagcagcgcgttgcctgcaatcataaccgaa
ctgctttccggtgctgtcgttcgtccaccctatggtggccatccacgggtcgccatatac
ggtttgctggaagcccgcttgcaacaggcggatcttgtcatctgtgcagggttgaacgaa
acagtctggccgcaaattgcgcagccggatccttggctggcatctgccatccgtcgccat
ttgggtctggccacgctcgatcgcaatgtcggcctttcggcgcacgatctggcgaccgcg
ctcggcgcaaaagatgtggtgctcacgcgggcacgccgtgatcgtggagggccgggcgtt
gcatcgcgcttcctgcttcggatgcgtgcctatcttggtgaggcgttgcagcaagatgca
accacgccgcaacttgccgcgctattagacgatgcgcctaaaaagctggacttcgcgccc
cggcccaaacccatgcccgcggcggagcagcgtcgcgtccgcatttcggtgaccgatttc
gaccagctcaagtcggacccctattccttttacgccaagcgtgttttgcggttacgtcct
atggacccggttgatgccgaacccgaccataaatggcgcggcatccttgtgcacgacata
ttggaaaaatggtttcgcgacgacaaatgcgccccggaaaagctggtcgcacgggcggaa
gctctgctgaccaatggcgcgcttgatcccatcctccggacgctttggcagccccgtatt
gcggacgggctgcgctggattgccgaacaaacgcaaaagctgcgcgacgaagatggtcga
cagctgttgatcgccgaagaaaagggatcgtttgaactgtccggcatcaccattaccggc
cgcgccgaccgtatcgatgccgccgccgatggcagcctgatcatcatggactataaaacc
ggcggatcgcccaagccgaagcagatcaatgcgggctttgcgttgcagttggggctgatc
ggtttgatggccgaacgcggcgcgataaagggcgtacgcggcgaggcgctgggcttcgaa
tattggagtttaggcaaagaccagaagcgtggtgcctttggatatatcgcccatgccacg
gcaacgaaggctagcgacaaaaagaaggctgccgatgaatttgtgaccttcattgcgggc
caggccgaagaagcgttgaacatgtggatattgggtgaagcacctttcacggcgaaactg
caccccgaatattccaactatgccgactatgaccatttgatgcgtcttcaggaatgggac
ggtcgccagtcgattgccgaggcggacggggcatga
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