Sphingorhabdus lacus: EUU25_05250
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Entry
EUU25_05250 CDS
T09898
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
slaa
Sphingorhabdus lacus
Pathway
slaa00300
Lysine biosynthesis
slaa00470
D-Amino acid metabolism
slaa01100
Metabolic pathways
slaa01110
Biosynthesis of secondary metabolites
slaa01120
Microbial metabolism in diverse environments
slaa01230
Biosynthesis of amino acids
Module
slaa_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
slaa00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
EUU25_05250
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
EUU25_05250
Enzymes [BR:
slaa01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
EUU25_05250
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Paralog
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GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
QGY80073
UniProt:
A0A6I6LCN8
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Position
1138599..1139405
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AA seq
268 aa
AA seq
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MARGNFHKMHGLGNDFIIIDTRTSPVEMTTARARALADRKTGIGCDQLILLEPSDMATVR
MRIFNQDGSEVESCGNATRCVVSLLGQDATIETDGGKIDGAYHEDRITLQMPPPRFDWQD
IPLAFAMDSAAMPMAWDELANPMAVNVGNPHAVFFVDDKDAIDLLHLGPQIEHDAAFPER
VNVNVASVRDGALFLRVWERGVGETRACGTGACATAVAAIRQGKVASPVTVNQAGGSLTI
GWEPGGLIEMTGGATYVFMGEVDWDDFG
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgtggtaactttcataaaatgcatggactgggcaatgatttcataatcattgat
acccggacatcccctgtggagatgaccacagcgcgcgcgcgcgctttggctgaccgaaaa
accggaattggctgcgaccaactgatccttctcgaaccctccgatatggcgacggtccgg
atgcggatattcaatcaggatggcagtgaagtcgaatcctgcggaaatgcgacgcggtgt
gtcgtatcgctgctcgggcaggatgcaacgatcgaaaccgacggcggaaagatcgacggc
gcctaccacgaagaccgtattacgctccaaatgccgcccccccgtttcgactggcaggat
attccactcgcattcgcgatggatagcgcagccatgcccatggcttgggatgaactggca
aacccgatggcggtaaatgtcggcaatccccacgcggtcttttttgtcgacgataaagac
gcgatcgatttgcttcatctggggccacaaatcgaacatgacgccgccttccccgaacgc
gtaaacgtcaatgtcgcgtcggtccgggacggggctctgttcttgcgcgtctgggaacgc
ggcgtcggtgaaacacgggcctgcggcacgggcgcatgtgccacggcagtcgccgccatc
cggcaaggtaaggtagcctcacctgtcaccgtcaatcaggctgggggcagtttgaccata
ggctgggaaccgggcgggctgatcgaaatgaccggcggggcgacttatgttttcatgggc
gaagtcgactgggacgatttcgggtga
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