Sphingorhabdus lacus: EUU25_05770
Help
Entry
EUU25_05770 CDS
T09898
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
slaa
Sphingorhabdus lacus
Brite
KEGG Orthology (KO) [BR:
slaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
slaa03016
]
EUU25_05770 (rnd)
Enzymes [BR:
slaa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
EUU25_05770 (rnd)
Transfer RNA biogenesis [BR:
slaa03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
EUU25_05770 (rnd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
QGY80167
UniProt:
A0A6I6L7V1
LinkDB
All DBs
Position
1239908..1241092
Genome browser
AA seq
394 aa
AA seq
DB search
MQIHPLITDSKRLAELCARLAQSPFVAVDTEFMRENTYYPDLCLIQLADANEAAAIDPKA
DGLDMTPMLELLCNNEDVLKVFHAGGQDIEIFFNLTGKTPHPMFDTQIAAMALGQGEQIG
YSNLVDLWMGIQLDKGARFTDWSRRPLDKRQIDYAIADVTHLSVIFPMMLEKLKSTGRGL
WLNDEMERISDAENYRNDPEKAWMRIKVQSRKPDVLGRLKAMAAWREREAQRKNIPRGRI
MKDETLADIAAHPPKTQADLPKVRGLSPAWRDNEIGARLIGVIEGAKPLSKDDLPERHRN
GAGGGKEGSLVADLLKLLLKIRSREINVAPRLIVRTEELERLAAGEREGLELLTGWRYEQ
FGHDALDLVEGRLAFAVVNGKLKMTRTHEEDLAP
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgcagattcatccactcatcaccgacagcaaacgcctcgccgaattatgcgcgcgcctt
gcgcaatcgccatttgttgcggttgatacagaatttatgcgggaaaacacttattatccc
gacctttgcctgatccagttggccgacgccaacgaagcggcggccatcgatcccaaggcc
gacgggctcgatatgaccccgatgctcgaacttttgtgcaataatgaagatgtgctgaag
gttttccatgccggtgggcaggatatcgaaatcttcttcaacctgacgggcaagacaccg
cacccgatgtttgacacgcagattgcggcgatggcgctgggccaaggcgagcagattggc
tattccaatctggttgatctgtggatgggtatccagctcgacaagggtgcgcgctttacc
gactggtcgcgtcgtccgctcgacaaaaggcagattgactatgccattgccgatgtgacg
catttgtcggtgattttcccgatgatgctcgaaaagctaaaaagcacgggccgcggtcta
tggctgaatgacgagatggagcggatttcggacgcggaaaactaccgcaatgatcctgaa
aaggcgtggatgcgcatcaaggtgcagtcgcgtaaacccgatgtgctcggccgtctgaag
gccatggccgcctggcgcgagcgagaggcgcagcgcaagaatatcccgcgcgggcggatc
atgaaggacgaaaccctcgccgacatcgccgcgcatccgcccaaaacgcaggccgacctg
cccaaggtgcgcggtctttcgccagcctggcgcgacaatgaaatcggcgcgcgcttgatt
ggcgttatcgagggggccaagccgctttccaaggatgatctgcccgaacgccaccgcaat
ggtgcgggcggcggcaaggaagggtctctggtcgccgatctgctgaagctgttgctgaaa
atccggtcgcgggaaatcaatgttgcgccgcgcctgatcgtgcggaccgaagagctggaa
cggctggcggcaggcgagcgggaggggttggagcttctgaccggctggcgttacgaacaa
tttggccatgatgcgttggatctggtggaaggccgtttggcctttgctgtcgtcaatggt
aagctgaagatgacgcgcacccatgaagaggatctggccccatga
DBGET
integrated database retrieval system
