Sphingorhabdus lacus: EUU25_06250
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Entry
EUU25_06250 CDS
T09898
Name
(GenBank) RNA polymerase sigma factor
KO
K24073
RNA polymerase sigma factor CnrH
Organism
slaa
Sphingorhabdus lacus
Brite
KEGG Orthology (KO) [BR:
slaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
slaa03021
]
EUU25_06250
Transcription machinery [BR:
slaa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
EUU25_06250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
PhyR_sigma-like
Xre-like-HTH
HTH_23
DUF134
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
QGY80251
UniProt:
A0A6I6L7I4
LinkDB
All DBs
Position
complement(1326811..1327383)
Genome browser
AA seq
190 aa
AA seq
DB search
MTLDLSRCDDRELASLAVAGQQQAFKELVGRHKSAVFRLIRNNVGDTDEALDLVQESFVS
AFSAINRYDPARPFRVWISRIALNKCRDWGRRRAVRSFFWLAKPIDADDILESDAPGPVR
EAESRAELKLVRRAMMDMPTPLREVLTLRTIEELTQTETAAILGISEKAVETRLYRARAR
LKGVLGEAEA
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
gtgacgctggacctgtcgcgatgtgatgaccgggaactggcgagcctggcggttgcgggt
cagcaacaggcattcaaggaactggtggggcgtcacaagagcgccgttttccgcctgatc
cggaacaatgtaggcgacactgacgaagcactcgatctcgtccaggagagttttgtttcg
gctttttcggcgatcaatcgctatgatcccgctcgcccgttccgggtctggatttcgcgt
attgctctcaacaaatgtcgcgactgggggcgaaggcgtgccgtgcggtcctttttctgg
ctggccaagccgatcgacgctgatgacattctagagagcgatgcgcctgggcctgtacgc
gaagcagaaagcagagccgaactcaagctcgttcgaagggcgatgatggatatgccgaca
ccgcttcgcgaagtccttactctgcgcacaatagaagagctcacccagaccgaaactgca
gccattttggggatcagtgaaaaggcggttgaaacaaggctatatcgggctagagcacgg
ctaaaaggagtgctgggcgaggctgaagcttaa
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integrated database retrieval system
