Sphingorhabdus lacus: EUU25_08085
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Entry
EUU25_08085 CDS
T09898
Symbol
thiC
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
slaa
Sphingorhabdus lacus
Pathway
slaa00730
Thiamine metabolism
slaa01100
Metabolic pathways
slaa01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
slaa00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
EUU25_08085 (thiC)
Enzymes [BR:
slaa01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
EUU25_08085 (thiC)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
QGY80581
UniProt:
A0A6I6L8D6
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All DBs
Position
complement(1708926..1710785)
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AA seq
619 aa
AA seq
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MADIPARTEIGVTTGPIRGSKKIYVGERRVAMREIHLEPSSGEQPVRVYDTSGPYTDPNA
LIDISAGLPEIRKDWIRARGDVEEVTQREVRPEDNGQLGPDRSGGVAPFPNVRKQVLRAK
PGMNVSQMHYARRGIITPEMEYVAERENLGRARLAEYIRDGESFGAEIPDYVTPEFVRDE
VARGRAIIPNNINHPESEPMAIGRNFLVKINANIGNSAVASDVATEVDKMVWSIRWGADT
VMDLSTGRNIHDTREWIIRNSPVPIGTVPIYQALEKVGGIAEDLTWDIFRDTLIEQAEQG
VDYFTIHAGVRLPYVPLAAKRVTGIVSRGGSIMAKWCLAHHKESFLYEHFDEITEIMKAY
DIAYSLGDGLRPGSIADANDEAQFAELYTLGELTHRAWKEDVQVMIEGPGHVPMHKIKEN
MTKQLEVCGEAPFYTLGPLTTDIAPGYDHITSGIGAAMIGWYGTAMLCYVTPKEHLGLPD
RDDVKVGVVTYKLAAHAADLAKGHPAAKVRDDALSKARFEFRWRDQFNLSLDPDTAEQYH
DQTLPAEGAKTAHFCSMCGPKFCSMKISQEVREFARLQNQPATEFVAAEEAEAGMAEMSK
VYDETGRELYMGAGDREHD
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atggcagacatccccgcacgcacagaaatcggcgttaccactggccctattcgcggcagc
aagaaaatctatgttggcgagcgccgcgtggcgatgcgcgaaatccatctggaaccgtcc
agcggggagcagcccgtacgtgtgtatgacaccagcggtccctatacggaccccaacgcc
cttatcgacatcagcgccggtctcccggaaatccgcaaggattggatccgcgcccggggc
gatgtcgaggaagtcacccaacgcgaagtgcgccccgaagataatggccaactcggcccc
gaccgcagcggcggcgtcgcgcctttccccaatgtccgcaagcaggtgctgcgcgccaag
ccgggcatgaatgttagccagatgcactatgcccgtcgcggcatcatcacgcccgagatg
gaatatgtggcggaacgcgaaaatctcggccgtgcgcgccttgccgaatatatccgcgat
ggtgagagcttcggcgcggaaatccccgactatgtcacccccgaatttgtacgggacgaa
gtggcacgcgggcgggcgatcatccccaacaatatcaaccatcccgaaagcgagccgatg
gccattggccgcaactttctggtcaagatcaacgccaatatcggcaacagcgccgttgcg
tccgacgtggcgaccgaggtggacaagatggtctggtcgatccgctggggcgcggacacg
gtgatggacctgtccacgggccgcaatatccacgacacccgcgaatggatcatccgcaac
agccccgtgccgatcggcaccgtgcccatctatcaggcgctggaaaaggtcggcggcatt
gcggaggacctgacctgggatatcttccgcgatacactgatcgaacaggcagagcagggc
gtcgattatttcaccatccacgcaggggtccgcctgccttacgtcccgctcgccgccaag
cgcgtgaccggcatcgtgtcgcgcggcggctccatcatggcgaaatggtgccttgcccat
cataaggaaagcttcctctacgaacatttcgacgagatcaccgagatcatgaaggcctat
gacatcgcctacagcctcggcgacgggctgcgtcccggatccatcgccgacgccaatgac
gaagcgcaatttgccgagctctacacgctgggcgaactcacccaccgcgcgtggaaggaa
gacgtgcaggtcatgatcgaagggccgggccatgtgcccatgcacaagatcaaggagaat
atgaccaagcagctcgaagtctgcggcgaggcacccttctacacattgggaccgctcacc
accgatatcgcgccgggctatgaccatatcaccagcggcatcggcgccgcgatgatcggc
tggtacggcaccgccatgctctgctacgtcacgcccaaggagcatctgggcctgcccgac
cgcgacgatgtgaaggtcggcgtcgtcacctacaagctcgccgcccacgccgccgacctc
gccaagggccaccccgccgcgaaggttcgcgacgatgcgctcagcaaggcgcggtttgag
ttccgctggcgcgaccagttcaacctcagcctcgaccccgacacggcggagcaatatcac
gaccagacgctaccagccgaaggcgcaaagaccgcgcatttctgcagcatgtgcgggccc
aaattctgctcgatgaagatcagccaggaagtgcgggagtttgcccgcctgcaaaaccaa
cccgccaccgaattcgtcgcggccgaagaggccgaggccggcatggcggaaatgagcaag
gtctatgacgagaccggacgcgaactctatatgggcgctggggacagggagcacgactag
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