Sphingorhabdus lacus: EUU25_09745
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Entry
EUU25_09745 CDS
T09898
Name
(GenBank) pyridoxal-dependent decarboxylase, exosortase A system-associated
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
slaa
Sphingorhabdus lacus
Pathway
slaa00300
Lysine biosynthesis
slaa00470
D-Amino acid metabolism
slaa01100
Metabolic pathways
slaa01110
Biosynthesis of secondary metabolites
slaa01120
Microbial metabolism in diverse environments
slaa01230
Biosynthesis of amino acids
Module
slaa_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
slaa00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
EUU25_09745
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
EUU25_09745
Enzymes [BR:
slaa01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
EUU25_09745
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
QGY80876
UniProt:
A0A6I6L9Z2
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All DBs
Position
complement(2075361..2076587)
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AA seq
408 aa
AA seq
DB search
MKATGPIPSGYEIVDGELAIGGMKTSALVAQAGDTPLFVYSTGHLRQRVADLRAAMPERL
AIHYAMKANPYSPLLSLMNELVDGFDVASGGELELALNAGVDAARISFAGPGKRDRELQR
AISLGVTLNCESEGEAARALAIGAQLGITPCIAIRVNPSFDLKGSGMKMGGGAKQFGVDA
ERVPALAQHLIAAGADWRGFHIYAGSQALSADAIIAMQAQTLALVGELTDAIGAAPPHVN
LGGGFGIPYFPGDEPVDIQAVGAALSEAFDVLPDILAETEFCIELGRYLVGEAGVYLTRI
VDRKISHGEVFLITDGGLHHQLAASGNFGTVIRRNYPVAIATRYEAEPEEVASIVGCLCT
PLDKLSDSAHLPRADVGDLVAIFCAGAYGASASPANFLGQGPAKEMLV
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcgactggtcccataccttcggggtacgaaatagttgatggtgaactcgcaatt
ggcgggatgaagaccagcgcattggtcgcgcaagccggggatacgccgctattcgtctat
tccaccgggcatttgcgtcagcgtgtggccgatctgcgcgccgccatgccggagcgattg
gcgattcattatgcgatgaaggccaatccctattcccccctgttgtcgttgatgaacgaa
cttgtcgacgggtttgatgtggcgtcaggaggcgagttggaactcgcccttaatgccggg
gtcgacgccgcccggatcagttttgcggggcccggcaagcgggatcgcgagcttcagcgt
gccatttcgctgggcgtaacgctcaactgtgaatccgaaggtgaagcggcgcgggcgctg
gcgattggtgcgcagcttggcatcacgccctgcatcgcgatccgggtaaaccccagcttt
gacctcaaagggtcgggcatgaaaatgggtggcggggccaagcaattcggtgtcgatgct
gaacgtgttccagccttggcacagcatctgattgccgcaggggccgattggcggggcttt
cacatatatgccggatcgcaggcattatcggccgacgccatcatcgcgatgcaggcgcag
acattggcgttagtcggcgaactcaccgacgcaatcggagcagcccccccacatgtcaat
ctgggcggcggctttgggattccttattttccaggcgacgagccggtcgatattcaggcg
gttggcgccgccctgtcggaggcgtttgatgtattgccggacattcttgccgagacggag
ttttgcattgagcttggacgttatctggtcggtgaggccggggtatatctgacccgcatc
gtcgaccgcaagatcagccacggagaggttttcctcatcaccgatggcggattgcaccat
caactggcggccagtggaaatttcggcacggtcatccggcgcaattatccggtggccatt
gccacgcgctatgaagcggagccggaagaggtcgcatctatcgtaggatgtttgtgcacg
ccgctcgataaattgtcggacagcgcgcatctgccgcgcgcggatgtgggcgatctggtc
gcgatcttttgtgcaggtgcctatggggccagcgcgagtcccgccaattttctggggcag
ggaccagcgaaggaaatgctggtttag
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