Sphingorhabdus lacus: EUU25_11995
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Entry
EUU25_11995 CDS
T09898
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
slaa
Sphingorhabdus lacus
Pathway
slaa03030
DNA replication
slaa03430
Mismatch repair
slaa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
slaa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EUU25_11995
03430 Mismatch repair
EUU25_11995
03440 Homologous recombination
EUU25_11995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
slaa03032
]
EUU25_11995
03400 DNA repair and recombination proteins [BR:
slaa03400
]
EUU25_11995
Enzymes [BR:
slaa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EUU25_11995
DNA replication proteins [BR:
slaa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
EUU25_11995
DNA repair and recombination proteins [BR:
slaa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
EUU25_11995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DUF5710
Motif
Other DBs
NCBI-ProteinID:
QGY81272
UniProt:
A0A6I6LFX9
LinkDB
All DBs
Position
2547611..2548495
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AA seq
294 aa
AA seq
DB search
MTNTTNRLTVDVAKNVVKKTDSDVRILHRVAQLKDLQLAPRGKGPFRIVGILDTETTGID
PEQDEIIDLALVTLEINGVGEIVKIISAQEGLREPSIPIPPKITAITGIADADVQGLKFE
TAVVEHRLHTADVLIAHCASFDIGFVERLIPSIAGAAWACSAKDFDWLTAGFDGRKLGHL
LNQVGYFNDSHRAMTDVVSLVHLLAHRLPSGRTVLSDLLDNASCRMTRLEACGAPYSKRH
QLKRRGYSWDARAKVWWIELSPVECDAEEDWLRDNIIARKHFDRTSITWRNRHR
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgactaatactacaaaccgcttaacggtcgacgtcgctaagaatgttgtcaaaaaaacc
gattcagacgtccgcattcttcaccgcgttgcgcagctaaaagatctgcagctcgcaccc
cgtggcaaggggccatttcgcattgttggtatccttgacaccgaaacaaccggtatcgac
cctgaacaagacgagataatcgacctcgcactcgtaacgcttgagataaatggcgttggc
gagatcgtgaaaataatcagcgcgcaagaagggcttcgagagccgagtattccgataccg
cctaagattactgctatcacaggcattgccgatgccgacgttcaaggtctgaaatttgag
acagcggtggtggagcaccgtttgcatactgctgacgtgttgatcgcgcattgtgcaagt
tttgacattggcttcgtggagcgtctgatccccagtatcgcaggggcagcatgggcatgc
tcggcgaaggattttgattggctgacagctgggtttgacggccgcaaactggggcacttg
ctgaaccaagttggctattttaacgactcccaccgcgcgatgaccgacgtcgtttcgctg
gtccatttgctcgcgcatcgcctgcccagtggccgaacagtactaagcgatttgctagat
aatgcttcgtgcaggatgacccgcctagaagcgtgcggggcgccttatagtaagcgtcat
cagctgaagcgtcggggctattcatgggatgcacgtgcgaaagtgtggtggatcgaacta
tcaccagttgaatgtgatgctgaggaggattggctccgcgacaacataattgcccgcaag
cattttgatcgcacgtcaatcacgtggcgcaatcggcatcgctga
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