KEGG   Sphingorhabdus lacus: EUU25_12360
Entry
EUU25_12360       CDS       T09898                                 
Name
(GenBank) ligase-associated DNA damage response DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
slaa  Sphingorhabdus lacus
Brite
KEGG Orthology (KO) [BR:slaa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:slaa03400]
    EUU25_12360
Enzymes [BR:slaa01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     EUU25_12360
    5.6.2.6  RNA 3'-5' helicase
     EUU25_12360
DNA repair and recombination proteins [BR:slaa03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    EUU25_12360
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr DEAD Helicase_C ResIII Cas3-like_C_2
Other DBs
NCBI-ProteinID: QGY81340
UniProt: A0A6I6L568
LinkDB
Position
2627685..2630090
AA seq 801 aa
MTLSPIIRDWFTARGWSPRRHQLDMLEAAAQNRHALLVAATGAGKTLAGFLPTLNALVTD
PAEGLHTLYISPLKALAVDVRRNLLMPIEEMGLPIRVETRTGDTPSDRKQRQRVKPPHIL
LTTPESLSLLLSHEDSVFLFSTLQRVIIDEVHAFANGKRGDLLSLSLARLQTLAPQMERV
ALSATVADPDDYRAWLAPDGDIDLVQLVTGEAAAEPDLQILLPEGRVPWAGHSGQHAIPQ
LIEEIGRNNITLIFCNTRFLAEYIFQKLWDANDPKYAIGIHHGSLSIEARRKVEGAMAEG
RLRALVCTASLDLGVDWGDVDCVIQMGAPKGSSRLLQRIGRSNHRMDEPSKAILVPGNRF
EYLEAQAAYDAVHEGVRDGETFQPGSYDVLAQHVMGIACAGPFDEAELLTEVQSALPYSA
LDAGTFHRVIEFVATGGYALKAYDKFRKLVLRPDGKWHLAHPKFAAQHRFNAGIIVDSPM
LDVRFRNGRKLGKVEEGFAATLTPGNRFTFAGMALEVESIKDLDLIVRASTKPANTIPSY
MGARMPLTTHLADRVRQMLTDRAGWARFPDDVREWLEMQDYRSQMPEAGQLLVETFPHDK
RHYMVAYPFEGWNAHQSLGMLLTRRMESRGLMPMGFVASDYALGVWSLKPIIDPTPLFSA
DILADEFIEWVEGSYLLKRAFREVAVISGLVERQHPGKRKTGKQVTFSTDLIYDVLRKYE
PDHLLLEAAWADARARLTDVGRLGNLLDRAADTMLHVDLERVSPLAVPLLVMIGRESVAQ
GSVDDELLLEAESLAGVAMTP
NT seq 2406 nt   +upstreamnt  +downstreamnt
gtgacgctctccccgatcattcgtgactggtttaccgcccgaggctggtcgcctcggcgg
catcagttggatatgctagaggctgctgcgcaaaaccggcatgctttgctggtggctgca
acgggcgctggcaagacattggcgggatttctgccgaccctgaatgcgttggtgaccgac
cctgctgaaggcctccacacgctttacatctccccgcttaaagcacttgccgtcgatgtc
cggcgcaatttgttgatgccgatcgaagaaatgggactgcccatccgggtggaaacacga
accggtgacacgccgtcggaccgcaagcaacggcagcgggtaaagcctccgcatattctg
ctgacaacaccggaatcgctgtcgctgttgctcagccatgaagacagcgtctttctgttt
tcaacgctgcaacgcgtgatcattgatgaggtgcacgcctttgccaatggcaagcggggc
gacttgctcagcctgtcgctcgcgcgcctgcagacgctggcgccgcagatggagcgcgtt
gccttgtcggcgaccgttgcggatcccgacgactatcgcgcctggctcgcccccgatggt
gacattgatctggtgcagcttgtgaccggtgaagccgcggcggagcctgacctccaaatc
ctgttgcccgaggggcgggtgccgtgggcagggcacagtggccagcatgcgattccccaa
ttgatcgaggaaattggccgcaacaacatcacactgattttctgcaacacccgttttctg
gccgaatatatattccagaaattatgggacgcgaacgatcccaaatatgcgatcgggatc
caccacggatcgctgtcgattgaggcgcgacgcaaggtcgagggcgcgatggccgagggc
agattgcgcgcgctggtgtgcacggcatctctcgatctgggcgtcgactggggcgatgtg
gactgcgtcatccagatgggcgcgccgaagggtagctcccgcttgctgcaacgtatcggc
cggtccaaccaccgcatggacgagccgagcaaagcgatattggtgcccggcaaccgcttc
gaatatctggaggcgcaggccgcttatgatgccgtccatgaaggcgtacgcgatggcgaa
acctttcagcccggcagctatgatgtgctggcccaacatgtcatgggcatcgcctgtgcc
ggaccattcgacgaagcagaactgctcaccgaagtgcaatcagccctgccctattccgcg
ctggatgcaggcacattccaccgcgtcatcgaattcgtcgcaacgggcggctatgcgctc
aaggcctatgacaagttccgcaaacttgttttgcgacccgacgggaaatggcatttggcg
caccccaaattcgccgcgcaacaccgcttcaacgccggaatcatcgtcgattccccaatg
ctggatgtgcgtttccgcaacgggcgcaaacttggcaaggtggaggaaggctttgccgcc
acgctgacccccggaaaccgtttcacctttgcaggcatggcccttgaggttgaatcgatc
aaggatctcgacctgatcgtccgcgcctcgaccaagcctgccaacacaatccccagctat
atgggcgcgcggatgcccctgaccacccatcttgccgaccgtgtccggcaaatgctgacc
gacagggcgggttgggcacgcttccccgacgatgtacgcgaatggctggagatgcaggac
tatcgcagccagatgccggaagccggacaattgctggtggagacatttccgcacgacaag
cggcattatatggttgcctatccgttcgaaggttggaacgcgcaccagtcacttggcatg
ttgctgacccgccggatggagagccggggtctgatgcctatgggctttgtggcaagcgac
tatgcgctgggtgtctggagcctgaagccgattatcgacccgacgccgctattttccgcg
gacatattggccgacgagttcatcgaatgggtcgaaggtagctatctgctcaaacgtgct
tttcgcgaagtggcggttatcagcgggctcgtggaacggcagcatccgggcaagcgcaaa
acgggcaagcaggtcaccttttctacggacctgatttatgacgtactccgcaaatatgaa
cccgaccatctgttgctggaggccgcctgggcggacgcgcgggcgcggctgaccgatgtc
gggcgtcttggtaatctgctcgaccgcgccgccgacacgatgctgcatgtcgacctagaa
cgggtcagtccgttggcagtgcctcttttggttatgatcgggcgggaaagcgtggcgcag
gggtcggtcgatgacgagttgctgctggaggccgaaagtttggctggcgtggcgatgacg
ccttaa

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