Sphingorhabdus lacus: EUU25_12910
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Entry
EUU25_12910 CDS
T09898
Name
(GenBank) phenylalanine--tRNA ligase subunit beta
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
slaa
Sphingorhabdus lacus
Pathway
slaa00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
slaa00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
EUU25_12910
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
slaa01007
]
EUU25_12910
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
slaa03016
]
EUU25_12910
Enzymes [BR:
slaa01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
EUU25_12910
Amino acid related enzymes [BR:
slaa01007
]
Aminoacyl-tRNA synthetase
Class II (U)
EUU25_12910
Transfer RNA biogenesis [BR:
slaa03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
EUU25_12910
Prokaryotic type
EUU25_12910
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
FDX-ACB
tRNA_bind
B5
Motif
Other DBs
NCBI-ProteinID:
QGY81428
UniProt:
A0A6I6LA50
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All DBs
Position
complement(2742747..2745131)
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AA seq
794 aa
AA seq
DB search
MKFSLSWLKDHLDTDADAQGVADALNRIGHEVESIDNPAEKLSAFRIARVLTAAPHPQAD
KLQVLSVDAGGEPLQVVCGAPNARAGMLGVFGPAGAVVPANGMVLKVAAIRGVESNGMMC
SIAELELGDDHDGIIELAEDAPVGQVYAQWAGLDDPVIDVSITPNRQDCMGVRGIARDLA
AAGLGKLRPLHDVYRMDSLAPISGEGPAPDIATHDPEGCPAFYAQAVSGVTNGPAPQWMR
DKLHAIGQKPISVLVDITNFISIDLGRPLHVYDRAKLNGPLVARKATDGEEVLALNGKTY
TLDSSMTVIADDGMVHDIGGVMGGEHSGVSESTTDVLIECAYFTPEHIARTGQKLTLTSD
ARQRFERGVDPEFLDDGLAIATKLVIDHCGGLPSAITRAGSPPVAPRNISYDPGHCLRLG
GVDVPANEQRNILERLGFSLTPEWQVTPPSWRRDVEGSADIVEEVVRMVGLDNVPSTPLP
RAEGVAKPTATAMQKIERKVRRTAAARGLNEAINWSFLPEKEANAFGGGHWSLANPISED
MKVMRPSLLPGLLSAAQRNMNRGASSVRLFEIGRRYLAESEHLTAAFVLAGEKAQRNWAS
GKATRFDAYDTKGEVLALLAAAGVATEGLMLMGEAGAHYHPGQSATLRMGPKNILAAFGT
LHPVTAKAFDLDGPVVAAEIFLDAIPHKKSATFMRTAYTPPALQAVTRDFAFLVPADMPA
GDLARSIKGADKQNIVDVRLFDQFSGQGVPEGQKSLAFEVTLQPVEKSYSDEDLKAISDR
IIAAASKQGAQLRG
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgaaattctcgctgagctggctcaaagatcatctggataccgacgccgacgcccaaggc
gttgccgatgcattgaatcgcatcggccatgaggtcgaaagtatcgataatcccgccgag
aaactgtcggcattccgtatcgcacgcgtcctgaccgctgccccgcatccgcaagcggac
aaattgcaggtgctttcggtcgacgccggtggcgaaccgcttcaggtagtctgcggcgcg
cctaatgctcgggcaggcatgctgggggtttttggtcccgccggcgcggtcgtgcctgcc
aatggcatggtcttgaaagttgcggccatacgcggtgtggaatccaacggcatgatgtgc
tccatcgcggaactggagctgggcgatgatcatgacggtatcatcgagttagccgaagat
gctccggtaggtcaggtatatgctcaatgggcaggcctagatgatcccgtaattgatgtc
agcatcacgcccaaccggcaagattgcatgggcgtgcgcggaattgcccgcgatctggcc
gcggcaggccttggcaagctgcgtccgctacacgacgtgtatcgcatggactcgctcgcg
ccgatatcgggcgaaggtcctgcacccgacattgccacgcacgatccagaaggctgcccc
gccttttacgcgcaagctgtttcgggcgtgaccaacgggcctgctccgcagtggatgcgc
gacaagttgcacgccattggtcagaaaccgatttcggtcctcgtcgacatcaccaacttt
atctcgatcgatctgggccgcccgttgcacgtctatgatcgtgcaaaactaaacggtccc
cttgtcgcgcgaaaagcgactgacggggaagaggtgctagcgttaaatggcaagacctat
acgctggatagcagcatgaccgtgattgccgatgacggcatggtccacgatattggtgga
gtcatgggaggcgagcattcgggcgtgtccgaaagcaccactgatgttctgatcgaatgc
gcctatttcacccccgaacatatcgcccgtaccgggcagaagcttaccctgactagcgat
gcccgtcagcggtttgagcgtggagtcgatccggaatttctggatgatggcctcgccatc
gctaccaaattggtgatcgaccactgcgggggcctgcccagtgcgattacgcgcgccggc
tcgccaccagttgcgccgcgcaacatttcctacgaccccggtcactgccttcggctcggc
ggcgttgatgttccagcaaatgaacagcgtaacattctggaaagactcggcttttcactg
acgccagagtggcaggtcacgccacctagctggcgccgcgacgtcgaaggctcggcagac
attgtcgaagaagtggtccgcatggttgggctggacaatgttccctccactccactgccc
cgggccgaaggtgtggcgaagccgaccgcgaccgccatgcaaaagattgagcgcaaggtt
cgccggaccgccgcagcgcgtggtttgaacgaagccatcaactggtcgttccttcccgaa
aaggaagcgaacgcctttggtggtggccattggtcgctcgccaatccgatcagcgaagat
atgaaggtcatgcggccgtcattgctgcctgggctgttatccgctgcgcagcggaacatg
aatcgaggcgcttcgtccgtccggcttttcgaaatcggccgtcgctatttggcggaaagc
gaacatttgaccgctgcctttgtcctcgccggggaaaaagcgcaacgcaactgggccagt
ggcaaggcaacgcggtttgatgcctatgataccaagggcgaggtcctcgctttgctggcc
gcggctggcgtggctaccgaaggcttgatgctcatgggcgaagccggggcacattatcac
cccggccaatcggcaactctgcgcatggggccaaagaatattctggccgcatttggtacg
ttgcatccggtgacggccaaggctttcgaccttgacggtccggttgttgcggccgagatt
tttctcgatgccatcccgcacaagaaaagtgcaactttcatgcgaaccgcctacacgcca
cctgcattgcaagcggtgacccgtgattttgccttcctcgtgccagccgatatgcccgct
ggcgatctggcccgttctatcaaaggtgccgataaacagaatattgtcgatgtccgtttg
ttcgaccagttcagtggacagggcgtcccggaaggccagaaatcattggcattcgaagtg
acgctgcagccggttgaaaagagctacagcgacgaagatttgaaagcgatttccgacagg
attatcgccgcagcgtccaagcagggtgcgcagttaagaggctaa
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