Sphingorhabdus lacus: EUU25_15390
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Entry
EUU25_15390 CDS
T09898
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
slaa
Sphingorhabdus lacus
Brite
KEGG Orthology (KO) [BR:
slaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
slaa03032
]
EUU25_15390
03036 Chromosome and associated proteins [BR:
slaa03036
]
EUU25_15390
03400 DNA repair and recombination proteins [BR:
slaa03400
]
EUU25_15390
DNA replication proteins [BR:
slaa03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
EUU25_15390
Chromosome and associated proteins [BR:
slaa03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
EUU25_15390
DNA repair and recombination proteins [BR:
slaa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
EUU25_15390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-DNA_bdg
ClpB_D2-small
HU-CCDC81_bac_2
HMG_box
Motif
Other DBs
NCBI-ProteinID:
QGY81874
UniProt:
A0A6I6LAR4
LinkDB
All DBs
Position
complement(3230438..3230716)
Genome browser
AA seq
92 aa
AA seq
DB search
MIRSELIKKLESENPELKTEEIEKIVDLFFNQIIQRLADGGRVELRGFGAFSTRERSPRK
GRNPRTGASVEVPSKRVPYFKPGKEVREQLNK
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atgatccggtccgagttgattaagaaattggagagcgaaaatcccgagctcaaaaccgaa
gaaatcgaaaaaatcgtcgatttgttctttaaccagattatccagcggctagccgatggc
ggtcgtgttgaactgcgcggtttcggagctttttcaacccgtgagcggagtccgcgcaaa
ggccgcaatccgcgaaccggcgcttctgttgaagtaccttccaagcgcgtaccatatttc
aagcccggcaaagaagtccgcgaacaattaaacaagtaa
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integrated database retrieval system
