Sphingorhabdus lacus: EUU25_16115
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Entry
EUU25_16115 CDS
T09898
Name
(GenBank) autotransporter outer membrane beta-barrel domain-containing protein
Organism
slaa
Sphingorhabdus lacus
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AC_1
Motif
Other DBs
NCBI-ProteinID:
QGY82005
UniProt:
A0A6I6L7D9
LinkDB
All DBs
Position
3374989..3383244
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AA seq
2751 aa
AA seq
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MNIESKARAGFTSIMLRGGRMTKWKGQVASYAPQVGHLQSVSVAAMAAALAFGGAMAVPS
EAQAQDVTVVVDSGAPAPVAEVNNGDGALIIRATVPVTGVEATNAASATDLDIETDDITS
PSNGVLATNNGSGLTSVNTTAGVVSATGGSGISVKTFGNGLDINAGQVSGSNMGISAENV
GLGVTNVTATGPISGGFSHGVSVFTDGLTSDINVNVADVSSGEKAITVTRNGGGPGDINI
TSTGTLNSFALGNISTVGVDASIQADTAQGNINIDVANIVAGAGIVTKNFAEGGTSIASS
GTITSTAGSGVHVVQGGQGFDVNIDVNDVNAKTVGIVAQNFGGGDVVIDAHDVTGGTGGI
SGFVNGGGTISITTTGTVNGGADGDGIAVTAAAGQTLPTPISIFSASSGGFGILANEPIV
NINVGTVTGGENGIAVTNEEPGDTLITSTGKVTGQKLVGVSAINGVDAINLTIDLVDVEG
NTYGVYAINNGIGASVLSVTGTATGNSRDGIHAENNGSTGDLSVTANIVSGGRDGIEAIN
NGNGVSTIIINGIVDGKNGDGIRAINNGDTQGLSVFSNDISATASITGSNYGIFAQNEGS
NGTVINVAGLVKGTASNGIYVYNGANTSTLEITANNVEGALDAIKAINKGTDNTTITLNG
SVTGGAGYNGIYATNAASAKDLTITSTALSVAGAATVEGDVNGILAVNDGVGGSTTVLSL
GKVVGTTASGIDVVNEVGTVDLSVTANDVEGALNAIKAINNGTGDTSVTLTGTATGGAGF
NGINVTNDSTARNLLVNATKLAVADANGVVAATVQGGDNGILAVNNGTGFTTVKAAGKIV
GTTGNGVEVSNAAVGTADPATGNVLSVEVNDVDGAQNGIFAINNGTGNALVKATGTVTGT
AGNGISLANNQNGLDMTIEANNVTGGLIGISAVNNAKGATNVTATGAVTGQAAEGIRASN
VASGTNIKVDALGDVSGNTAGILVDNDGSGFFLVKVGGNVTGGAAFSGISADNATTAKDL
TITATNANATIEGGYNGIRAINRGVGGSTTVSAAGTVVGTSNAGIFASNEVNTLNLTVNA
NNVTGGTDGIFAENKGTGFTTVTASGAVTGGVNGNGIYATNAASAKDLTISSTALSVAGA
ATVQGGVNGILAVNDGVGGSTSVTAAGKVVGRSYNGIDATNNTGTVDLTITAADVSGAST
GILALNYGSGATTVISTGTVTGTDEDGIVVYGSGAGDITVRSVNVSGEEGIDVTNFGNGS
STFITSTGNVEGKELNGIYAYNSAAAKNLTIAAVNVSGLSNGIFAENQGTGSTTITVSGN
VTGGADDNGVYATNAASAKDLTINATKLAVADATGVLIPTILGGEYGILAKNYGLDGSTN
ITVAGAVVGSVSDGIRATNYSGAKDIIIFANSVTGGDNGIIAEMESGAVGEINVTALGEV
IGTLNNGIDLTNDNASTNLIVTANKVTGGGTGVFVQNSGIGFTQLTLTGDVRGADFGISA
TNAATAKDLTINATNAAATITGGGFAGIRAVNDGVGGSTNVSSLGKVVGTTGSGVDATNE
VDTLNLTVSANDVTGGTIGINASNKGTGSTLVKSTGLVSGANGEGILAVNEGTSLSIDAT
DVTGSADAIDATNNGSDFTSIVLRGNVTAGRIGVDVKNAATAKDVTIIAANPAAVITGAN
NGIVVNNSGKDASTSITVAGDVIGTNLAGINVQNNSGTANLTINAADVSGGTDGIYSLNA
GTGFTRITTSGVVAGDNKGISANNLASASDLTINAHIVSGEKAIIALNQGTGSTSVRTTG
LVTGTVGNAISVTNQALAESLAIDVVDVTANVENGIDAINNGKGVTALTVRGDVNAGRIG
INVLNAESAKDVTIAAADIATSIVGANNGIIVTNFGQGASTSIAVAGSVEGTKLTGITVQ
NNIGAANLTISANNVKGGTDGIFAINQGTGSTEIKTSGVVEGVLKGISVNNSASAKDLTI
NAANVAGSITGGVNGILALNNGIDGSTTITAAGTVTGTTNAGISASNEVNSLNLTINANN
VTGGTDGLVAFNGGKGATTLDAKGDIKGVRDGVHIENAATASTLTVSVKNVTGGIDGLDV
INDGTGASTVSISGKVAGGTGVGVATTSKAGKLTTINLAATADVSATSGNAITNDLGDSV
LNVANGAVITGTVRLGDGSDTANILLSSTAAFAGVTALDGGDNFAAADGFVDTLNLNGAG
SFDLVGARVTNWELINFNAGTVGFSDALITAGALNVNNGATLNAANSLVATANVNVASNG
TLLVGNVSGNSNARIVGDFTSAGLVNLSGTVGKAGDKLNVTANFTGANGRVRLDTVLDGD
NSPTDTLNIAGNAIGSTLIVVKNVGGTGGLTLGDGIKLVQVGGKSDQTAFRLLDENVQAG
GFRYGLFLGGIADPNDQDWYLRTTGLSDVAATTLSFARLSDDIAMTFLGTLHERVGEQEH
LAKRGYSGGAMSGLWGRFVGKGFRERLSSRILGDVKSNGSITGLQMGLDIVRNIKGDGSA
TFAGIYAGHADGSSSDQNVFRGTARQSGTSKSDGWLAGIYGTHYAPSGWYANAVIQSNWL
DAKAIGRNGTTLETDGRTWLGSVELGKALKLAERAEFETQVQLIYGNTKFDTALDSSGAE
NRVDIENSLIGRVGFRLKTTKGEKYNAEGGLFSGYLKANLWHNLSGADVELTNAGQSVGG
FEPKKTWVDAGLGTTLTMSKNTELFFDADVDFGLDQKTTAGTGKVGLRINW
NT seq
8256 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcgaatcaaaagcgcgcgccggcttcacctccatcatgcttcgcggaggtcgc
atgacaaaatggaagggtcaggtcgccagctatgcgccgcaagtcggtcatttgcagtct
gtttcggtcgccgcgatggccgccgccctcgcctttggcggtgcgatggcggtgccttcg
gaggcgcaggctcaggatgtgacggtcgttgtcgacagcggggcgcctgctccggttgct
gaagtcaacaatggagatggcgctctgatcatacgcgcaaccgtgccggtcaccggcgtg
gaggcgaccaatgcggccagcgccacggacctcgacattgaaacagatgacatcacaagt
ccatcgaacggagtcctggcgaccaataacgggtcgggtctgacgtccgtcaacaccacc
gcaggtgtggtgagcgcgacgggcgggagcggtattagcgtcaagacgttcggtaacggt
ctggatatcaatgcgggtcaggtaagtggctcaaacatgggcatctcggccgagaatgtc
ggtttgggtgtgaccaatgtcacggcgaccggaccgatatccggcggcttttcacatggc
gtcagcgtcttcaccgatggattgacgagcgacatcaacgtcaatgttgcggatgtgagc
agtggtgaaaaagcgatcactgtcacacgaaacggtggtggccccggcgacatcaacatt
acatccaccggcacgttgaattcatttgcactgggcaatatttccacggtcggcgttgac
gcgagcattcaagcggacacggcgcagggcaatatcaacattgatgtcgccaacatcgtg
gctggcgcgggcattgtgacgaagaattttgcggaaggcggcacctccattgcatcgtct
ggcacgatcacctcaacggcgggttcgggcgttcatgttgtccagggtggccaaggtttc
gacgtcaatatcgacgtgaatgatgtcaacgcaaagacggtcggcatcgtcgctcagaat
ttcggcggtggtgatgtggtcatcgacgcccatgatgtgaccggcggcacaggcgggatc
agcggctttgtaaatggcggtggtacgatctcgatcacgacgaccgggaccgtcaacggt
ggcgcggacggggatggcatagctgtcaccgccgcagctggtcaaacgttgcccaccccc
atttccattttctcggcttcgtccggtggtttcggcattttggcgaatgaacctatcgtc
aacatcaatgtcggcacggtgaccggtggagaaaatggcattgctgtcacaaacgaagaa
ccaggtgacaccctgatcacatcaactggaaaagttacaggacagaagctcgttggggtc
agcgccatcaacggtgttgacgcgatcaatttgaccatcgatcttgtcgatgtcgaaggc
aacacttacggtgtctatgccatcaacaatggcattggggcgagcgtccttagcgtgacc
ggaaccgctacgggcaattcgcgagatggcattcacgccgaaaacaacgggtcgacgggc
gatttgtcggtcactgccaatattgtttccggcggaagggatggcattgaggccatcaac
aacggcaatggcgtttcgacaatcatcatcaacgggatcgtcgatggcaaaaatggcgac
ggcattcgcgccattaacaatggtgacacgcagggactgtcggttttttcgaacgacata
tccgctaccgcctccatcacgggcagcaactacggcattttcgcgcagaatgagggctcg
aacggaaccgtcatcaacgtcgccggccttgtcaaaggcacagccagtaatggaatctat
gtctacaatggcgcgaatacttcgacgttagaaattaccgcgaacaatgtcgaaggtgcg
ttggatgccattaaagcgattaataaaggcacggacaacacaaccatcactctgaacggg
agcgtaactggcggagcgggctataacggcatctacgcgacgaacgcagcttcggcgaag
gatttgacgatcacgtcgaccgccctgtcggttgcaggcgctgcgacagtggagggtgac
gtcaatggcatccttgcggtcaatgacggcgtgggtggttcgaccaccgtgttgagcctg
ggcaaagttgtcggcacgaccgccagcggcatcgacgtggtgaacgaggtaggcacagtt
gatctgtcggtcacggccaatgatgtcgaaggcgctttgaacgcgatcaaggcgatcaac
aacggcaccggcgataccagtgtgacgctgacaggcactgcgaccggtggggctggtttc
aacggtatcaacgtcaccaatgactcaaccgcgcgcaatcttttggtcaacgcgacgaag
cttgcggtggccgacgcgaatggtgtggtcgcagcgacggttcagggcggtgacaacggt
atccttgcggtgaacaatggcacgggcttcaccactgtgaaggccgccggaaagattgtc
ggaaccactggcaacggcgttgaggtcagcaatgcagcggtgggcaccgccgatccggcg
accggcaatgtgctgagcgtggaagtgaacgacgtcgatggcgcacaaaatggtatcttt
gcgatcaacaatggcaccggcaatgcgcttgtaaaggctaccggtacggtaacaggcacg
gccggtaacgggatcagcctggccaataaccagaatggtcttgatatgaccattgaagcc
aacaacgtaacgggtggtttgatcggcatctcggcggtcaacaacgcaaagggcgcaacc
aatgttaccgcgaccggcgctgtgaccgggcaggccgctgaaggtatccgcgcatcgaac
gttgcaagtggcaccaacatcaaggtggacgcacttggcgatgtgtccggtaacacggcg
ggcatattggtcgacaatgatggcagcggcttctttctggtcaaagtaggcggcaacgtc
accggcggggcggccttcagcggcatcagcgccgacaacgcgacgaccgcgaaagacctg
accatcaccgccaccaatgcgaacgcaacgattgagggcggctataacggcatccgcgcg
atcaaccgtggcgtcggtggatcgaccacggtctcggcagctggcacagtggtagggaca
agcaatgcaggcatctttgcatcaaatgaggtcaacaccctcaacctgaccgtcaacgcc
aacaatgtcaccggcggcaccgacggcatctttgccgagaataagggtacaggctttacg
actgtgacagccagcggagcagtcactggtggtgtgaacgggaacggcatctacgcgacg
aacgcggcttcggcgaaggatctcaccatctcgtctaccgctttgtcggttgcaggtgct
gcgaccgtgcagggcggtgtaaacggtatccttgcggtcaatgacggcgtgggtggttcg
acctctgttacagctgccggtaaagttgtaggccggtcgtacaacggtatcgacgccacg
aacaacactggcacagttgaccttaccattactgcggcagatgtttctggcgcttcaacc
ggcatattggctttgaactatggttctggcgcaaccaccgttatctcgacaggcacggta
acgggtaccgatgaagacggcatcgtcgtttatggcagcggtgctggagatattactgtt
cgatctgtcaatgtgtcgggtgaagaaggtattgatgtcaccaattttggaaatgggtcg
tcaaccttcattacgtcgaccggcaacgtcgaaggcaaagaattaaacggtatctatgcc
tacaactccgcagcggcgaagaatctgactatcgctgcggttaatgtgagcggtttgagt
aacggtatcttcgccgaaaaccagggcactggttcaacaacaataaccgtaagcggcaat
gtaacgggcggtgctgatgacaatggcgtctatgcaacgaacgctgcatcagcaaaggat
ctgacgatcaatgcgacgaagcttgcggttgcggatgcaactggcgtgttgatacctacg
atattaggaggtgaatacggtatactcgctaaaaactacggccttgacgggtcaacgaat
ataacggttgccggtgctgttgttggctcagtaagtgacggtattcgcgcgacaaactat
agcggcgcgaaagacattatcatatttgcaaatagtgtcacaggcggtgacaacggaatt
attgcagagatggaaagtggagctgtcggcgagataaatgttactgcacttggtgaggtg
atcgggacattgaataacggcattgatctcacaaatgacaatgcttctaccaatctgatt
gtcacagcaaacaaggtgaccggtggcggtaccggagtgttcgtacagaatagtggcata
ggttttacgcaattgacgttgactggcgatgtgcgtggcgcagattttggcataagcgcg
acgaacgcggcgaccgcaaaagatctgacaattaatgcaacgaacgcggctgcgacgatt
acaggaggaggtttcgctggtatccgcgcggtcaatgacggcgtcggtggttccaccaac
gtgtcgagcctgggcaaggttgtcggcacgaccggcagcggcgtcgatgccaccaacgag
gtagataccctcaacctgaccgtcagtgccaatgatgtcactggcggcaccataggcatc
aacgcgtcgaacaagggaaccggctctactctggttaaatcgacgggtcttgtcagtggc
gcaaacggcgaaggtatcttggccgtgaatgaagggaccagcctgtcgattgatgcgacg
gatgttaccggttcagctgatgcaatcgatgcgacaaataatggctctgactttacctct
attgttctcagaggaaatgtgaccgccggacgcattggtgtagatgtaaagaatgccgca
actgcaaaggatgtgacaatcatcgccgccaatccagcggctgtgataacaggtgccaat
aacggcatagtcgtaaataattccggcaaagatgcatctacttcaatcactgtcgcggga
gatgtaattggcacaaatctggctggcataaatgttcaaaacaatagcgggacagccaac
ctcaccatcaatgcggccgatgtgagcggcggcaccgatggcatttacagcttgaacgcc
ggcactggatttacgcgaatcacaacttctggcgtggttgcaggcgataacaaaggcatt
agcgcgaacaatcttgcctcggccagtgacctgacaattaacgcacatatcgtgagtggt
gagaaagccattatcgcccttaatcagggtaccggatcgacttcggtgcggactacaggt
ctcgtcacaggaaccgttggtaatgcaatatccgtcaccaatcaggccttggcagagagc
cttgccattgatgtggtagatgtcacggcgaacgtcgaaaacggtattgacgccatcaac
aatggtaaaggcgttaccgcattgaccgttcggggggatgttaacgctggccggataggg
attaacgttctcaatgccgaatctgcgaaagatgtgactatcgctgcggctgatatcgcg
acgtcgatcgtgggagcgaacaacggtataattgtcaccaatttcggtcagggagcatct
acctcgatcgctgttgctggcagtgtggagggtacaaaacttaccggcattaccgttcaa
aacaacattggcgcagctaacctcaccatcagcgcaaataacgtgaaaggtgggacagac
ggcatattcgccataaatcaagggacaggttcgaccgagattaaaacgtccggcgtggta
gaaggcgttttaaagggtatctcggtaaacaactcggcgtcggcgaaagatctgacaatc
aatgcagctaatgtggcgggctcgatcaccgggggcgtcaacggtatcctggcgttgaac
aacggtattgacggatcgaccaccatcacggcggccggtacggttacagggacaaccaat
gcgggcatctctgcatcgaatgaagtcaacagtctcaacctgaccatcaatgccaacaac
gtcacaggcgggaccgacgggcttgtcgcgttcaacggaggcaaaggcgcaaccacgctg
gatgctaagggcgacatcaagggtgtgcgcgatggtgtgcatattgaaaatgccgccact
gcgtcgacactaacggtatcggtgaagaatgtaaccggcggtatcgatggcctggatgtc
atcaacgacggcacaggagcatcgaccgtttcaatcagcggaaaagttgctggcggaacg
ggcgtgggcgtggcgacgaccagcaaggctggcaagttgacgaccataaatcttgcagcg
acagcggatgtttccgcaacgtccggaaatgccatcaccaacgatctgggtgatagcgtt
ctgaacgttgcaaatggcgccgtcatcacaggtactgttcgtctcggcgacggaagcgat
acggcgaacatcctgctttcgagcacggccgcgttcgccggggttaccgcgctggatggt
ggggacaattttgctgctgcggatggttttgtggacacgctcaacttgaacggtgcagga
agttttgacctggtcggtgcgcgtgtaacaaattgggagttgatcaatttcaatgcggga
actgtcggcttcagcgatgcgctgatcaccgccggggcgctgaatgtgaacaacggtgcc
accctcaacgctgcaaacagcctggtcgcaacggcaaatgtcaatgtcgcgtccaacggt
acgttgctggtgggcaacgtgagtggcaacagcaatgcacgcattgtcggcgattttacg
agcgccggattagtcaatctcagcggtacggttggcaaagcaggcgacaagttgaatgtc
actgcgaacttcaccggtgcaaatgggcgagtgcgcttggatactgtgctcgatggtgac
aattcgccgacagatacactcaatattgccggtaatgccatcggcagcaccctgattgtc
gtcaaaaatgtgggcggcacagggggtctgaccctcggcgatggtatcaagctcgttcag
gttggtgggaagtccgaccaaacagcattccgattgctcgacgaaaacgttcaggcgggc
ggcttccgctatggtctgttcctcggcggcatcgctgaccccaatgaccaggattggtat
ctgcgcaccacaggtctcagcgatgttgccgcaaccaccctttcgttcgcacggttgagc
gatgatatcgcaatgaccttcctgggcaccttgcacgagcgcgttggtgagcaagagcat
cttgcgaaacgcggatatagtggcggcgcgatgagcgggttgtggggacggttcgtcggc
aaaggcttccgtgaacgtctctcttcgcgcatattgggtgatgtgaagtccaacgggtcc
attacgggtctgcagatgggtcttgatatcgtccgcaatatcaagggcgacggctctgcg
acatttgccggcatctatgcgggccatgccgatggaagttcgtccgaccagaatgtcttc
cgcggaaccgctcgtcagtcgggtacttcgaaaagcgatggttggctggccggcatctat
ggaacccactatgctccgtcgggatggtacgccaatgctgtgatccagtcgaactggctc
gatgccaaggcgatcggccggaacggtacgacgctggagacagacggtcgcacgtggctg
ggatctgtggaactgggtaaagcgctgaagctggcagagcgtgccgagttcgaaacgcaa
gtccagttgatctatggcaacaccaagttcgacaccgctctcgacagcagcggggccgaa
aacagggttgatatcgaaaacagcctgatcggccgtgtcggtttccgcctcaagaccacc
aaaggcgaaaaatataacgctgaaggcggcttgttcagtgggtacctcaaggcgaacctg
tggcacaatctgtcgggcgctgatgtggagctgaccaatgcaggtcaatcggtcggcggt
tttgagcccaaaaagacatgggtcgatgcgggtcttggaaccacgctgacaatgtcgaaa
aacacagagctgtttttcgatgcggatgtggatttcggtctcgaccagaaaaccaccgcc
ggaaccggaaaagtaggtctgcggatcaactggtaa
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