Stenotrophomonas lactitubi: AB9L18_00300
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Entry
AB9L18_00300 CDS
T10939
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
slab Stenotrophomonas lactitubi
Pathway
slab03420
Nucleotide excision repair
slab03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
slab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AB9L18_00300 (uvrD)
03430 Mismatch repair
AB9L18_00300 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
slab03400
]
AB9L18_00300 (uvrD)
Enzymes [BR:
slab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AB9L18_00300 (uvrD)
DNA repair and recombination proteins [BR:
slab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AB9L18_00300 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
AB9L18_00300 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
AAA_12
InPase
Motif
Other DBs
NCBI-ProteinID:
XGY86122
LinkDB
All DBs
Position
71518..73710
Genome browser
AA seq
730 aa
AA seq
DB search
MDVSHLLDGLNPAQREAVSAPLGHHLVLAGAGSGKTRVLTHRIAWLHEVEGVPTHGIFAV
TFTNKAAGEMRHRIDAQLPHGSRGMWIGTFHGLANRLLRLHWQDAKLPESFQVMDSDDQL
RLVKRVVQALELDDGKYPPKQIAWWINAQKDEGRRPQHIQPEPNDAWLETMRQAYAEYQA
RCDRAGLVDFAELLLRAHELLRDNPPLLSHYRARFREILVDEFQDTNAIQYAFVRVLAGH
EGHVFVVGDDDQAIYGWRGAKVENVQGFLRDFPGAQTIRLEQNYRSTANILNAANAVIAH
NPDRIGKQLWTDSGDGDPIDLYAAYNEMDEARYIVERARQWVRDGGSYTEVAVLYRSNAQ
SRALEEALLSEQVPYRVYGGMRFFERAEVKDALAYLRLLSNRNDDAAFERAVNTPTRGIG
DRTLDEVRREARTQGISLWEATMLVTQGSALAARARNALAGFLVLVNELQAQTQQMTLAE
RVDHVLVRSQLREHWSKESRNALDSESRTDNLDELVSVASRFVRRADDIEEVGEDMDELV
AFLAYAALEAGEGQAQAGEEGVQLMTLHSAKGLEFPLVFLAGVEEGLFPSARSLEESGRL
EEERRLAYVGITRARQKLVLSYAESRRIHGQDNYSLPSRFLREIPRELLHEVRPKVQVSR
PASMGASRVMGHAAIEAPPIKLGALVNHPKFGEGMVTDYEGNGAHARVQIEFADAGSKWL
VMAYANLTVI
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atggatgtctcccacttgcttgatggcctgaacccggcccagcgcgaagccgtctccgct
cccctcggtcaccacctggtgctggccggtgccgggtcgggcaagacgcgcgtactcacc
caccgcattgcctggctgcatgaagtcgaaggcgtgccgacgcacggcattttcgcggtg
accttcaccaacaaggccgctggcgagatgcgccatcgcatcgacgcacagctgccgcat
ggcagccgcggcatgtggatcggcaccttccacggcctggccaaccgcctgctgcgcctg
cactggcaggacgccaagctgccggaaagcttccaggtgatggattcggacgatcagctg
cggctggtcaagcgcgtggtacaggcgctggagctggatgacggcaagtacccgcccaag
cagattgcctggtggatcaacgcgcagaaggatgaaggccgccgcccgcagcacatccag
cccgagccgaacgatgcgtggctggaaaccatgcgccaggcctatgccgagtaccaggcg
cgctgcgaccgcgccggcctggtcgatttcgccgagctgctgctgcgcgcgcacgaactg
ctgcgcgacaatccgccgttgctgtcgcattaccgcgcgcggttccgcgagatcctggtg
gacgaattccaggataccaacgccatccagtacgccttcgtgcgcgtgctggccgggcat
gagggccacgtgttcgtggtcggtgacgatgaccaggccatctatggctggcgcggtgcc
aaggtcgagaacgtgcagggcttcctgcgcgatttcccgggcgcgcagaccatccgcctg
gaacagaactaccgttccaccgccaacatcctcaacgccgccaacgcggtgatcgcgcac
aacccggaccgcatcggcaagcagctgtggaccgacagcggcgacggcgatccgatcgac
ctgtacgcggcgtacaacgagatggacgaggcgcgctacatcgtcgagcgcgcgcggcag
tgggtgcgcgacggtggcagctataccgaagtggccgtgctctaccgcagcaacgcgcag
tcacgcgcgcttgaagaagcgctgctgagcgaacaggtgccgtaccgcgtgtacgggggc
atgcgcttcttcgagcgcgccgaagtgaaggatgcgctggcgtacctgcgcctgctgtcc
aaccgcaacgacgacgctgcattcgagcgcgcggtgaacacgcccacgcgtggcatcggt
gaccgcacgctggacgaagtgcgccgcgaagcacgcacccagggcatctcgctgtgggaa
gccaccatgctggtgacccagggcagtgcattggcggcgcgtgcgcgcaacgcgctggcc
ggcttcctggtgctggtcaatgaactgcaggcgcagacccagcagatgaccctggccgag
cgcgtggaccatgtgctggtgcgttcgcagctgcgcgaacactggagcaaggaaagccgc
aacgcgctggattcggaatcgcgcaccgacaacctcgacgaactggtgtcggtggcctcg
cgcttcgtgcgccgtgccgacgacatcgaggaagtgggcgaggacatggacgagctggtc
gcgttcctggcctatgccgcgctggaagctggtgaaggccaggcgcaggcgggcgaggag
ggcgtgcagctgatgacgctgcactcggccaagggcctggaattcccgctggtgttcctg
gccggcgtggaagagggcctgttccccagcgcacggtcgctggaggaaagcgggcggctg
gaagaagagcgtcggctggcctacgtcggcatcacccgtgcacgacagaagctggtgctg
agctacgccgaatcgcggcgcatccatggccaggacaactacagcctgccgtcgcgcttc
ctgcgcgagatcccgcgcgagctgctgcacgaagtacggccaaaggtgcaggtctcgcga
ccggcctcgatgggcgcaagccgggtgatgggacatgccgccatcgaagcgccgccgatc
aagctgggcgcgctggtcaaccatcccaagttcggcgaaggcatggtgaccgactacgaa
ggcaacggcgcccacgcacgtgtgcagatcgagttcgccgacgccggcagcaagtggctg
gtgatggcatatgccaacctgacggtgatctga
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