Stenotrophomonas lactitubi: AB9L18_00360
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Entry
AB9L18_00360 CDS
T10939
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
slab Stenotrophomonas lactitubi
Pathway
slab03030
DNA replication
slab03410
Base excision repair
slab03420
Nucleotide excision repair
slab03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
slab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AB9L18_00360 (polA)
03410 Base excision repair
AB9L18_00360 (polA)
03420 Nucleotide excision repair
AB9L18_00360 (polA)
03440 Homologous recombination
AB9L18_00360 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
slab03032
]
AB9L18_00360 (polA)
03400 DNA repair and recombination proteins [BR:
slab03400
]
AB9L18_00360 (polA)
Enzymes [BR:
slab01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AB9L18_00360 (polA)
DNA replication proteins [BR:
slab03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
AB9L18_00360 (polA)
DNA repair and recombination proteins [BR:
slab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
AB9L18_00360 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AB9L18_00360 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
XGY86133
LinkDB
All DBs
Position
83391..86165
Genome browser
AA seq
924 aa
AA seq
DB search
MSRLVLIDGSSYLYRAFHALPPLSNAQGEPTGALFGVVNMLRSTLKERPAYVAFVVDAPG
KTFRDDLYDQYKANRPPMPDELRSQVEPMCRIVEALGISILRIDGVEADDVIGTLALQGV
AQDLKVTISTGDKDFAQLVRPGIELVNTMTGSRMDSDAAVMDKFGVRADQIVDLLALMGD
TVDNVPGVEKCGPKTAAKWLAEYQHLDGVIAAAPTMKGKIGENLRAALGRLPLNKELVTI
RTDVALDASPTTLALRDPDVPTLGELYLRYGFTQALKELGGPVPAPAVATDATPSLRGTA
AGFARGSAEAPPAGELDPALSAPGEYETVLTTEQLQAWVARVQQADLISFDTETDALDAM
RARLVGISLAVEPGKAAYIPVGHDYPGAPAQLPLAQVLDALRPVLQDPAKKKLGQHGKYD
LHVLRRHGVDVQGYHDDTMLESFVLNSTATRHDMDSLALRYLGYNTIKFEEVAGKGAKQI
SFSQVGIDEASRYAAEDADITLRLHHALQPQLRAEPTLDSVYRSIEMPLVPVLTSIEANG
VRIDTDELRRQSQDLSSRMLAAQQKATELAGRSFNLDSPKQLQAVLFDELKLPAVVKTPK
GQPSTNEEALEAIAEQHELPRVILEYRGLAKLRSTYTDKLPEMVNPDTGRVHTSYHQSGA
ATGRLSSSDPNLQNIPIRTEDGRRIRRAFIAPEGFQLLAADYSQIELRIMAHLSGDPGLV
RAFEQGADVHRATAAEVFGRTLEEVTSNERRAAKAINFGLMYGMSAFGLARNLGIDRGQA
QDYVALYFSRYPGVRDFMERMREQAREQGYVETLFGRRLYLNDIHARNQGLRAGAERAAI
NAPMQGTAADIIKRAMVAVDQWLRDSGAPARMILQVHDELVFEAETGFIEELRSNVVQHM
SQAAQLRVPLVVDTGTGSNWDEAH
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atgagcagattagtcctgatcgacgggtccagttacctgtaccgcgcgttccacgcgctg
ccgcccctgtccaatgcacagggtgagcccaccggcgcgctgttcggcgtggtcaacatg
ctgcgctcgacgctgaaggaacgcccggcctacgtcgcgttcgtcgtcgatgcccccggc
aagaccttccgtgacgacctgtacgaccagtacaaggccaaccgcccgccgatgcccgac
gaactgcgcagccaggtcgagccgatgtgccgcatcgtcgaggcgctgggcatcagcatc
ctgcgcatcgacggcgtggaggccgacgatgtgatcggcaccctggccctgcagggcgtg
gcacaggacctgaaggtcaccatctcgaccggcgacaaggatttcgcccagctggtccgg
ccgggcatcgaactggtcaacaccatgaccggcagccgcatggattcggacgcggcggtg
atggacaagttcggcgtgcgtgccgaccagatcgtcgacctgctggcgctgatgggcgac
accgtggacaacgtgcccggggtcgagaagtgcgggccgaagacggcggccaagtggctg
gccgaataccagcacctggacggggtgatcgcggccgcgccgaccatgaagggcaagatc
ggcgagaacctgcgcgccgcgctggggcggctgccgctgaacaaggagctggtgaccatc
cgcaccgacgtcgcgctggacgccagcccgaccacgctggccctgcgcgatccggacgtg
cccacgctgggcgagctgtacctgcgttacggcttcacccaggcgttgaaggaactgggt
gggccggtaccagcgcctgcggtggccaccgacgcgacgccgagcctgcgtggcaccgcg
gccggctttgcccgtggcagcgccgaagcgccgccggcgggcgaactcgatccggcgctg
tcggcgcctggcgagtacgagaccgtgctgaccaccgagcagctgcaggcctgggtcgca
cgcgtgcagcaggccgatctgatcagcttcgataccgagaccgacgcactggatgcgatg
cgcgcgcggctggtgggcatcagcctggcggtggagccgggcaaggccgcctacatcccg
gtcggccatgactatccgggcgcgccggcacagctgccgctggcacaggtgcttgatgca
ctgcggccggtgctgcaggacccggcgaagaagaagctgggccagcatggcaagtacgac
ctgcacgtgctgcgccgccatggcgtggacgtgcagggctaccacgacgacaccatgctc
gagagcttcgtgctcaattccaccgccacccgccacgacatggattcgctggccctgcgt
tacctgggctacaacaccatcaagttcgaggaggtggccggcaagggcgccaagcagatc
tcgttctcgcaggtgggcatcgacgaggccagccgctacgccgccgaagacgccgacatc
accctgcgcctgcaccatgcgctgcagccgcagctgcgggccgaaccgaccctggacagc
gtgtaccgcagcatcgagatgccgctggtgccggtgctgaccagcatcgaagccaacggc
gtgcggatcgacaccgacgaactgcgccggcagagccaagacctgtcctcgcgcatgctg
gccgcgcagcagaaggccaccgaactggccggacgcagcttcaacctggattcgcccaag
cagctgcaggcggtgctgttcgacgaactgaagctgccggcggtggtgaagaccccgaag
ggccagcccagcaccaatgaagaggcgctggaggcgattgccgagcagcacgagctgccg
agggtgatccttgaataccgtggcctggccaagctgcgcagcacctataccgacaagctg
ccggagatggtcaacccggataccggccgggtgcacaccagctaccaccagtccggcgcc
gccaccggccgcctgtcttcgtccgatccgaacctgcagaacatcccgatccgcaccgag
gatggccgccgcatccgccgcgcgttcatcgccccggaaggtttccagctgctggcggcc
gactattcgcagatcgaactgcggatcatggcccacctgtccggagacccgggcctggtg
cgcgccttcgagcagggcgcggatgtgcatcgcgccaccgccgccgaggtattcggccgc
accctggaagaagtgaccagcaacgagcgtcgcgcggccaaggcgatcaacttcggcctg
atgtacggcatgagcgcgttcggactggcccgcaacctcggcatcgaccgaggccaggcg
caggactacgtggcgctgtacttcagtcgctatccgggcgtgcgtgacttcatggagcgc
atgcgcgagcaggcccgggagcagggctacgtggagaccctgttcggtcgccgcctgtac
ctgaacgacattcatgcacgtaaccagggcctgcgtgccggcgctgaacgtgcggcgatc
aatgccccgatgcagggcacggccgccgacatcatcaagcgcgccatggtcgcggtggat
cagtggctgcgtgacagcggtgccccggcgcggatgatcctgcaggtgcacgatgaactg
gtattcgaagccgagaccggattcattgaagagctgcgcagcaatgtcgtgcagcacatg
tcgcaagcagcacaattgcgcgtgccgctggtggttgataccggcaccggcagtaactgg
gatgaggcgcactga
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