Stenotrophomonas lactitubi: AB9L18_00960
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Entry
AB9L18_00960 CDS
T10939
Name
(GenBank) RHS repeat-associated core domain-containing protein
Organism
slab Stenotrophomonas lactitubi
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6531
RHS
Motif
Other DBs
NCBI-ProteinID:
XGY86250
LinkDB
All DBs
Position
215944..220641
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AA seq
1565 aa
AA seq
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MLERLKTISCAALAMIALGSLAPWAAQAQEVQKKWESYLSMGQPRATEAAVQKDIKAFFA
HYEDDKPFVWEVKRQRVQASKVVYDYRAKPEAIITTDWIYTHSDHEYASEAEVRNVILAL
RASDPQCPATTLSEEEWVEFPGLGQGDDGSITHEDKKFHYTQHRSLGGPCSAVQGWEYVR
RDRTALCPNRSGMLWNDAIQMCSLVQQDEPPMAPLLSYTSTPLPPQQCPVGNPCDPTTGD
KSQPEPDFDLGWVSFGRHYHSLSSTAGGALGTGWTHSHNLRLTAGVDDSTFPPSPELKVG
LVGADGGQTAFQKVGASYEAMDGSGDRAVQQGTNWQLSRAGERIHFDAAGLMQRREFADG
TSLTYAYDSRGRLLSITHSTGRRVDVQYLAPGDDSLITALVVAGQPVVSYAYSPAGELIS
ATYADGASRTYHYEDARFPGYLTGVTAEDTRRYSWFGYDAKGRVTCSRHSGDCSQANVGI
DGVRLEYTPAGTTIVTDALGKQSTYALTASGSSGLPRKVNGITDSNGTAGRTYLPEGADF
RRRLQSSTDRRGVVTQYAYAEASDPAAGAVAVTTTTEAAGTPQQRVSETRVAMDSNRLVQ
QTVGNREIRIARNARLQPTTITVRDMVTGDTRVTTQTYCEAEGPECPLVGLLRSVDGPRT
DVADVSTYAWYTADDAGCATGGACSYRKGDLRSVTNALGQTVETLAYDVLGRPLSVKDAN
GAVTDYTYHARSWPTSVTVRGATTAEDRATHISYWPTGQVQQVTEPDGSSVTYVYDAAQR
LTDIADSAGNTIHYTLDNAGNRLQENTVDAGGTLRRTLARVYNTLGQLTTLKDAGNNATG
FAYDANGNPQSVSDALQRETTQQYDPLNRLAQTLQDVGGVAAEIRSQYNALDQVTQVTDP
KGLHTTYAYNGFGDLTGQVSPDSGSATFTVDAAGNRKTRTDARGVTATYSYDALNRLVGI
AYPDPNLDVGYHYDTAPAVCANDERFAKGRLGQVLHANGSTVYCHDRFGQVTRKVQTING
VASTLRYAYSKSGRLTALTYPDGSVADYARDALGRISQIGLTRPGQARQVVVNNVTYAAF
GPATGWTYGNGRQLQRPLDLDYRPQAVHDPAAGGLSLGYGYDPVGSITELKNGAGSEVLA
KYAYDTLGRLTQTQDGATGTPIETYGYDATGNRTSLTTSAGTASYTYPADSHRLIAVDGQ
ARNQDAAGNTISIGGKAFAYNDANRMNAVKQGDAVVESYGYNHRGERVLREPASGDAQVT
VYDEGGQWIGNYSATGQAQQQAIWLDNYPVALIQTPTAGVPELAYIQPDHLGTPRVVIDP
VRDVAVWAWSNKSEVFGDQAPANDPDGDGVAFDLTLRFPGQQSTDASGLFYNYQREYEPE
VGRYSQSDPIGLEGGISAYAYVNSAPTLATDPLGLRKSLAILSASEQGGIPLFGDNPFGH
IALATESGLYSYGTSHAYGSSVGEYIQSQLTNRSVEIVEFETSAAQEALMESVMKSHNSK
DYNVKSHNCATAVADSLISIDAIKNRSILPGRVFQDAYLMEGAKYYFIPKGGVIPPAILG
GGDGR
NT seq
4698 nt
NT seq
+upstream
nt +downstream
nt
atgttggaacgactgaagaccatttcgtgtgccgcactggcgatgatcgcgctgggcagc
ttggctccttgggctgcgcaggcgcaggaggtgcagaagaagtgggagagctacctgtcg
atgggccagccgcgagccaccgaggcagcggtacagaaggacatcaaggcgttctttgca
cactacgaggacgacaagccgttcgtctgggaggtgaagcggcagcgcgtacaggcaagc
aaggtcgtctacgactaccgtgcgaagcccgaggcgatcattaccaccgactggatctac
acacactccgatcatgagtacgcatccgaagctgaagtacgtaatgtaatcctggccctc
cgcgcgagtgacccacagtgtccagccaccacactgtcggaagaggagtgggttgagttt
ccgggactcgggcaaggtgacgacggaagcatcacgcacgaggacaaaaaattccattac
acgcaacacagatcccttggcggaccgtgttccgcggttcaaggctgggagtatgtgcgc
cgggacagaaccgccctatgcccgaatcggtccggcatgctgtggaacgatgccatccaa
atgtgctcgctggtacagcaggacgagccgccgatggcacccttgctgtcttacacgagc
acgccactgccgccacagcagtgtccggtcgggaacccctgcgatcccaccactggcgat
aaatcccagccagagcccgattttgatcttggatgggtgagcttcggtcgtcactatcat
tcgctctccagcacggcaggaggtgcgttgggtacgggctggacccattcccacaatctg
cgccttactgcgggcgtagacgattccaccttccctcccagccccgaattgaaagttggg
ctggtcggcgcagatggcgggcagacagcattccagaaagtgggtgcaagctacgaagcc
atggacggaagcggcgatcgcgctgtccagcagggcaccaactggcaactttcacgtgcc
ggagagcgcattcattttgatgctgctggcttgatgcagcgccgtgaatttgcagacgga
acgtcgctgacctatgcatatgacagccgtggccgcctgctcagcatcacccattcaacc
ggtcggcgtgtggacgtccagtatctcgcgccgggtgacgattcgctgatcacggccttg
gtggttgccggccagcctgtggtgagctacgcctattcccccgccggcgaattgatcagt
gcgacctacgcagacggtgccagccgcacgtatcactatgaggacgcccgcttcccgggc
tatctgaccggcgtgaccgccgaagacacccgtcgctacagctggttcggctacgacgcc
aaggggcgggtcacctgcagccgccactccggcgattgcagtcaagccaacgtgggcatt
gatggcgtgcgcctggagtacaccccggcgggcactaccatcgtcaccgacgcactgggc
aagcagagcacgtacgcgcttaccgcgagtggcagcagcggtcttccacgcaaggtcaac
ggcatcaccgacagcaacggcaccgctggtcgtacctatctgccagagggcgccgacttc
cgccgtcgcctgcagtcctccaccgacagacgcggcgtggtcacccagtacgcttacgcc
gaggccagcgacccggccgccggtgcagtagccgtgacaacgacgacggaagcggctgga
acaccccagcaacgcgtcagcgagacgcgcgtggccatggacagcaatcggctggtccag
cagaccgtcggcaaccgtgagatccgcatcgcgcgcaatgcacgccttcagccgaccacc
atcaccgtgcgcgacatggtgaccggtgacacccgcgtcaccacgcagacctactgtgag
gccgaagggccggagtgcccgctggtgggactgctgcgcagtgtggatggcccgcgaacc
gatgtggcggatgtctccacctatgcctggtacaccgcggacgacgcgggatgcgcgact
ggtggtgcctgcagctatcgcaagggcgacctgcgcagcgtgaccaatgcgctgggccag
acggtcgagaccttggcctacgacgtgctcggacgaccgttgtcggtcaaggacgccaat
ggcgcggtcaccgattacacctaccatgcccgcagctggccgacctcggtcaccgtgcgc
ggtgccaccacagccgaggaccgggctacccatatcagctactggcccaccggccaggta
cagcaggtcaccgagcccgacggcagcagcgtcacttacgtctacgacgccgcacagcgg
ctgacggacattgccgacagcgccggcaacaccattcactacaccctagacaacgccggc
aaccgcctgcaggagaacacggtcgatgcgggtggcacgctgcgccgcacgctggcccgt
gtctacaacacactcgggcaactgaccacgctgaaggatgccggcaataacgccaccggc
tttgcctacgatgccaatggcaatccgcagtcggtcagcgatgccctgcagcgtgagacg
acccagcagtacgatccgctgaaccggctggcgcagaccctgcaggacgtgggcggtgtc
gctgcggagatccgcagccagtacaacgcgctggatcaggtcacccaggtgaccgatccc
aaggggctgcataccacgtatgcctacaatggttttggtgatctgaccgggcaggtcagt
ccggacagtgggagtgctactttcactgttgatgctgctggcaatcgcaagacccgcacc
gatgcgcgcggcgtgactgccacctacagctacgacgcgctcaatcggcttgtcggtatc
gcctatcctgatcccaacctggacgtgggctatcactacgacaccgcgccagcggtatgt
gccaatgacgagcgtttcgccaagggtcgcctgggtcaggtgctgcacgccaatggcagc
accgtgtactgccatgaccgcttcggccaggtcacccgcaaggtgcagacgatcaatggc
gtggccagcacactgcgctatgcgtacagtaaatctggtcgcctgaccgcattgacctac
ccggacggaagtgtggcggactacgcacgcgacgccctgggtcgtatcagccagattggg
ctgactcgcccgggacaggcccggcaggtggtggtcaacaacgtgacctatgcagccttc
gggcccgcgacgggctggacctatggcaatgggcgccaattgcagcgcccgctggatctg
gactaccgcccgcaggcggtgcatgaccccgcggcaggcggtctgtcactgggctacggc
tacgatcccgttggttcgatcaccgagctgaagaacggcgcaggttccgaggtgctggcc
aaatacgcctacgacacactcggccgcctgacccagacccaggatggcgccacgggtacg
ccgattgaaacctacggctacgacgccaccggcaaccgcacgtcgctgaccacgtcggcc
gggaccgccagctacacctatccggctgacagccatcgcctgattgccgtggatggtcag
gcgcgtaaccaggatgcagcgggcaataccatcagcattggcggcaaggcgttcgcctac
aacgacgccaaccgcatgaatgcggtgaagcagggcgatgctgtcgtggagagctacggt
tacaaccatcgcggtgagcgcgtgctgcgtgagccagccagtggcgatgcgcaggtcacg
gtctatgacgaagggggccagtggatcggcaactactcggccaccgggcaggcgcagcag
caggcgatctggctggacaactacccggtggcgctgatccagacaccaactgcaggcgtg
ccggagctggcgtacatccaacccgatcacctgggtacgccgcgcgtagtgattgacccc
gtgcgcgatgtcgcggtctgggcgtggagcaacaagagtgaggtgtttggcgatcaggca
ccggccaatgacccagacggggatggcgtggcgtttgatctgacgctgcgcttcccgggc
cagcagtcgacggatgcgagtgggctgttctacaactaccagcgggagtacgaaccggag
gtggggcggtactcgcagagtgatccgattgggttggaggggggtatatctgcgtacgct
tatgtgaacagtgcgccaaccttggccacagatccgctggggctgcggaagagtctggca
attctgtccgcttccgagcaaggaggtatcccactgtttggtgataatccgttcggccac
attgctcttgcaaccgagtcgggtctatatagctacggaacatcgcacgcttatggctcg
tcggttggtgaatatatccagtcccagctgacaaatagaagcgtagaaattgtggagttc
gaaacgtccgctgcgcaggaagcacttatggagagcgtcatgaagtcgcacaactccaag
gattacaacgtcaaatcacacaactgcgcaaccgcggtcgcagattcgttaatttcgatc
gatgccataaagaatagatcaatccttcctggtcgtgttttccaggatgcatatcttatg
gaaggtgcaaagtactacttcataccaaaaggtggtgtcattccacctgcgattctggga
gggggtgatggaaggtaa
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