Stenotrophomonas lactitubi: AB9L18_02160
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Entry
AB9L18_02160 CDS
T10939
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
slab Stenotrophomonas lactitubi
Pathway
slab03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
slab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AB9L18_02160 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slab03019
]
AB9L18_02160 (groL)
03110 Chaperones and folding catalysts [BR:
slab03110
]
AB9L18_02160 (groL)
03029 Mitochondrial biogenesis [BR:
slab03029
]
AB9L18_02160 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
slab04147
]
AB9L18_02160 (groL)
Enzymes [BR:
slab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
AB9L18_02160 (groL)
Messenger RNA biogenesis [BR:
slab03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
AB9L18_02160 (groL)
Chaperones and folding catalysts [BR:
slab03110
]
Heat shock proteins
HSP60 / Chaperonin
AB9L18_02160 (groL)
Mitochondrial biogenesis [BR:
slab03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
AB9L18_02160 (groL)
Exosome [BR:
slab04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
AB9L18_02160 (groL)
Exosomal proteins of other body fluids (saliva and urine)
AB9L18_02160 (groL)
Exosomal proteins of breast cancer cells
AB9L18_02160 (groL)
Exosomal proteins of colorectal cancer cells
AB9L18_02160 (groL)
Exosomal proteins of bladder cancer cells
AB9L18_02160 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
XGY86475
LinkDB
All DBs
Position
464329..465978
Genome browser
AA seq
549 aa
AA seq
DB search
MAAKDIRFGEDARSRMVRGVNVLANAVKATLGPKGRNVVLEKSFGAPTITKDGVSVAKEI
ELADKFENMGAQMVKEVASRTNDDAGDGTTTATVLAQALIREGAKAVAAGMNPMDLKRGI
DKAVVAAVAELKNISKPTADDKAIAQVGTISANSDESIGQIIANAMKEVGKEGVITVEEG
SGLDNELDVVKGMQFDRGYLSPYFINNQQSQTADLDDPYILLHDKKISNVRDLLPVLEGV
AKAGKPLLIVAEEVEGEALATLVVNTIRGIVKVVAVKAPGFGDRRKAMLEDMAVLTGGTV
ISEEVGLSLEKATIKDLGRAKKVQVSKENTTIIDGVGDKAAVDSRVAQIKTQIEDTSSDY
DREKLQERVAKLAGGVAVIKVGASTEIEMKEKKDRVDDALHATRAAVEEGVVPGGGVALV
RAVSALAGLKGANEDQNHGIQIALRAMEAPLREIVANAGEEPSVIVNKVKEGTGSFGYNA
ATGEFGDMLQFGILDPTKVTRSALQNAASIAGLMITTEAMVADAPKKDEPAMGGAGGMGG
MGGMGGMDF
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggctgccaaggatattcgtttcggtgaagacgcccgttcgcgcatggtgcgcggcgtc
aacgttctcgccaatgccgtcaaggccaccctgggcccgaagggccgcaacgtcgtgctg
gagaagagcttcggcgccccgaccatcaccaaggacggcgtgtccgtcgccaaggaaatc
gaactggctgacaagttcgagaacatgggcgcgcagatggtgaaggaagtcgcgtcgcgt
accaacgacgacgccggcgacggcaccaccaccgccaccgtgctggcccaggccctgatc
cgcgaaggcgccaaggccgttgctgccggcatgaacccgatggacctcaagcgcggtatc
gacaaggccgtcgtggctgccgtcgccgagctgaagaacatctccaagccgaccgctgac
gacaaggccatcgcccaggtcggcacgatctcggccaactcggacgagtcgatcggccag
atcatcgccaacgcgatgaaggaagtcggcaaggaaggcgtgatcaccgttgaagaaggc
tcgggcctggacaacgagctggacgtggtcaagggcatgcagttcgaccgcggctacctg
tccccgtacttcatcaacaaccagcagtcgcagaccgctgacctggatgacccgtacatc
ctgctgcacgacaagaagatctccaacgtccgtgacctgctgccggtgctggaaggcgtc
gccaaggccggcaagccgctgctgatcgtcgccgaggaagtcgaaggcgaagcgctggcg
accctggtggtcaacaccatccgcggcatcgtcaaggtcgtggccgtcaaggcgccgggc
ttcggcgaccgtcgcaaggcgatgctggaagacatggccgtgctgaccggcggcaccgtg
atctccgaggaagtcggcctgtcgctggaaaaggccaccatcaaggacctgggccgcgcc
aagaaggtgcaggtttccaaggaaaacaccaccatcatcgatggcgtgggtgacaaggct
gcggtcgattcgcgcgttgcgcagatcaagacccagatcgaagacacctcctcggactac
gaccgcgagaagctgcaggagcgcgtggccaagctggccggtggcgttgcagtgatcaag
gtcggcgcttcgaccgaaatcgaaatgaaggaaaagaaggatcgcgtcgacgacgccctg
cacgcgacccgtgcggccgttgaagaaggcgtggttccgggcggcggcgttgccctggtc
cgtgcggtctccgcgctggctggcctgaagggtgccaacgaagaccagaaccacggcatc
cagatcgccctgcgggcgatggaagccccgctgcgcgaaatcgtcgccaacgccggcgaa
gagccgtcggtcatcgtcaacaaggtcaaggaaggcaccggcagcttcggctacaacgcc
gccaccggcgagttcggtgacatgctgcagttcggcatcctggacccgaccaaggtgacc
cgttcggcactgcagaacgcagcctcgatcgctggcctgatgatcaccaccgaagccatg
gttgccgacgctccgaagaaggacgagccggccatgggcggcgctggtggcatgggcggc
atgggtggcatgggcggcatggacttctaa
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