KEGG   Stenotrophomonas lactitubi: AB9L18_02665
Entry
AB9L18_02665      CDS       T10939                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
slab  Stenotrophomonas lactitubi
Pathway
slab00010  Glycolysis / Gluconeogenesis
slab00020  Citrate cycle (TCA cycle)
slab00260  Glycine, serine and threonine metabolism
slab00280  Valine, leucine and isoleucine degradation
slab00310  Lysine degradation
slab00380  Tryptophan metabolism
slab00620  Pyruvate metabolism
slab00630  Glyoxylate and dicarboxylate metabolism
slab00640  Propanoate metabolism
slab00670  One carbon pool by folate
slab00785  Lipoic acid metabolism
slab01100  Metabolic pathways
slab01110  Biosynthesis of secondary metabolites
slab01120  Microbial metabolism in diverse environments
slab01200  Carbon metabolism
slab01210  2-Oxocarboxylic acid metabolism
slab01240  Biosynthesis of cofactors
Module
slab_M00009  Citrate cycle (TCA cycle, Krebs cycle)
slab_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
slab_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA
slab_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
slab_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:slab00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    AB9L18_02665 (lpdA)
   00020 Citrate cycle (TCA cycle)
    AB9L18_02665 (lpdA)
   00620 Pyruvate metabolism
    AB9L18_02665 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    AB9L18_02665 (lpdA)
   00640 Propanoate metabolism
    AB9L18_02665 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    AB9L18_02665 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    AB9L18_02665 (lpdA)
   00310 Lysine degradation
    AB9L18_02665 (lpdA)
   00380 Tryptophan metabolism
    AB9L18_02665 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    AB9L18_02665 (lpdA)
   00670 One carbon pool by folate
    AB9L18_02665 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:slab04147]
    AB9L18_02665 (lpdA)
Enzymes [BR:slab01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     AB9L18_02665 (lpdA)
Exosome [BR:slab04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   AB9L18_02665 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Biotin_lipoyl Pyr_redox_3 FAD_oxidored BSH_YknX GIDA Thi4 HI0933_like NAD_binding_8 FAD_binding_2 BSH_CusB BSH_Fcp1 AlaDh_PNT_C GCV_H DUF478 RnfC_N BSH_CzcB 3HCDH_N Amino_oxidase BSH_RND FAD_binding_3
Other DBs
NCBI-ProteinID: XGY86569
LinkDB
Position
570188..571996
AA seq 602 aa
MATIEIKVPDIGDYSDVPVIEVLVAVGDTVKKDQGLVTLESDKATLEVPSSAAGVVKEIK
VKLGDTLSEGAVVVLLETEGAAEAPAKAAAPAPAAAAPASKPPVTPSHRAPAEPAAPKPA
LASGKAADIECEMVVLGSGPGGYTAAFRAADVGLDTVLVERYASLGGVCLNVGCIPSKAL
LHAAAVIDEVAHAGDFGVEFGKPTITLDKLRQYKEKVVNQLTKGLAGMAKQRKVRNVQGV
GKFVSANELLITAEDGSTQLLRFQKCIIAAGSQAVKLPNFPWDDKRVMDSTDALELAEVP
GSLLVVGGGIIGLEMATVYGALGSKVTVVEFMDQLMPGADKDLVKPLADRLKKQGIEVHL
KTKASGVTADAKGITVTFEAAEEGQTPALAQGTFDRVLVAVGRSPNGKKIDADKAGVQVT
DRGFIPVDRQMRTNVPHIFAIGDIVGNPMLAHKATHEGKLAAEVAAGHKKEWVARVIPSV
AYTNPEIAWVGVTETEAKAKGLKVGVAKFPWAASGRAIGIGRTEGFTKLIFDEDSHRIIG
GAIVGVHAGDLLAEIGLAIEMGAEAEDIGHTIHAHPTLSESVAMASEIYDGTITDLYMPK
KK
NT seq 1809 nt   +upstreamnt  +downstreamnt
atggccacgattgaaatcaaggttcccgacatcggcgattacagcgatgtaccggtgatc
gaagtgctggtcgccgttggcgatacggtgaagaaagaccagggtctggtgaccctggag
tcggacaaggcgaccctggaagtgccgtcctcggctgccggcgtggtcaaggaaatcaag
gtcaagctgggcgacaccctgtccgaaggcgcggtcgtcgtgctgctggagaccgagggc
gccgctgaagcgccagccaaggctgctgcgccggccccggctgcagccgctccggccagc
aagccgccggtgaccccgtcgcaccgcgccccggccgagccggcagcaccgaagccggcg
ctggccagtggcaaggccgccgacatcgaatgcgaaatggtcgtgctgggctcgggcccg
ggcggctacaccgccgccttccgtgccgccgacgtcggcctggatacggtgctggtcgaa
cgctatgccagcctcggcggcgtctgcctcaacgtgggctgcattccgtccaaggcgctg
ctgcatgccgctgcggtgatcgacgaagtcgcccacgccggtgatttcggcgtcgagttc
ggcaagccgaccatcaccctggacaagctgcgccagtacaaggaaaaggtcgtcaaccag
ctgaccaagggcctggccggcatggccaagcagcgcaaggtccgcaacgtgcagggcgtg
ggcaaattcgtgtcggccaacgaactgctgatcacggctgaagacggcagcacccagctg
ctgcgcttccagaagtgcatcatcgccgccggttcgcaggcggtgaagctgccgaacttc
ccgtgggacgacaagcgcgtgatggactccaccgatgcactggaactggccgaagtgccg
ggttcgctgctggtcgtgggtggcggcatcatcggcctggaaatggccaccgtgtatggc
gcgctgggcagcaaggtgaccgtggtcgagttcatggatcagctgatgccgggcgccgac
aaggacctggtcaagccgctggccgaccgcctgaagaagcagggcatcgaggtccatctg
aagaccaaggcctccggcgtgaccgccgatgccaagggcatcaccgtgaccttcgaagcc
gccgaggaagggcagacgccggcattggcgcagggcaccttcgaccgcgtgctggtggcc
gtgggccgctcgccgaacggcaagaagatcgacgcggacaaggccggcgtgcaggtcacc
gaccgcggcttcattccggtcgaccggcagatgcgcaccaacgtgccgcacatctttgcc
atcggcgatatcgtcggcaacccgatgctggcccacaaggccacgcatgagggcaagctg
gcggccgaagtggctgccggccacaagaaggaatgggtggcccgcgtgattccgtcggtg
gcctacaccaacccggaaatcgcctgggtcggcgtgaccgagaccgaagccaaggccaag
ggcctgaaggtcggcgtggccaagttcccgtgggccgccagcggccgcgcgatcggcatc
ggtcgcaccgagggcttcaccaagctgatcttcgacgaagacagccatcgcatcatcggt
ggtgccatcgtcggtgtgcatgctggtgatctgctggccgagatcggcctggcgatcgag
atgggtgcagaggccgaggacatcggccacaccatccatgcgcacccgacgttgagcgaa
tcggtggcgatggcctcggaaatctacgacggcacgatcaccgatctgtacatgccgaag
aagaaataa

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