Stenotrophomonas lactitubi: AB9L18_02900
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Entry
AB9L18_02900 CDS
T10939
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
slab Stenotrophomonas lactitubi
Pathway
slab00300
Lysine biosynthesis
slab00470
D-Amino acid metabolism
slab01100
Metabolic pathways
slab01110
Biosynthesis of secondary metabolites
slab01120
Microbial metabolism in diverse environments
slab01230
Biosynthesis of amino acids
Module
slab_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
slab00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
AB9L18_02900 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
AB9L18_02900 (dapF)
Enzymes [BR:
slab01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
AB9L18_02900 (dapF)
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Paralog
GFIT
Motif
Pfam:
DAP_epimerase
CntK_N
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
XGY86616
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All DBs
Position
620559..621410
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AA seq
283 aa
AA seq
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MSKAGSNGLRFSKMHGAGNDFVVIDLRDGIPPPTPELAARLADRHTGVGCDQILTIEPPR
AEGSVASYRIWNADGSNSEQCGNGARCIAAWLVREGSAQGDHFVIDSPLASHAVEVLGDG
QYAVAMGVPLFEPAQVPLIGFAHPREEYLLPLQGETVRFAAVSMGNPHAVIEVGLVDAAP
VERVGGLLQQHASFPKSVNVGFAQVMGPEHVRLRVFERGVGETLACGSGACAAAVTLMHR
GRLQRDARISLPGGDLRIQWPGDGQPVVMAGPTAFVFEGEWIA
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaggccggtagcaatggcctgcgcttcagcaagatgcacggcgcgggcaacgat
ttcgtagtgatcgacctgcgcgacggcatcccgccgcccaccccggaactggccgcacgc
ctggccgaccgccataccggcgtcggctgcgatcagatcctgaccatcgagccgccgcgc
gccgaaggctcggtcgcctcgtaccgcatctggaacgccgatggttccaattccgagcag
tgcggcaacggcgcgcgctgcatcgcggcctggctggtgcgcgagggcagtgcgcagggc
gatcacttcgtgatcgacagcccgctggccagccacgccgtggaagtgctcggcgatggc
cagtacgcggtggcgatgggcgtgccgctgttcgaaccggcgcaggtgccgctgatcggc
ttcgcccacccgcgcgaggaatacctgctgccactgcagggtgagaccgtgcgcttcgcg
gcggtgtcgatgggcaatccgcacgcggtgatcgaggtgggcctggtcgacgccgcaccg
gtcgagcgcgtgggcggattgctgcagcagcatgcctcgttcccgaagtcggtgaacgtg
ggcttcgcgcaggtgatgggcccggaacatgtgcgcctgcgcgtgttcgagcgcggcgtg
ggtgaaaccctggcctgcggcagtggcgcctgcgcggctgcggtgaccctgatgcatcgc
ggccgcctgcagcgcgatgcgcgcatcagcctgcccggtggcgacctgcgcatccagtgg
ccgggcgatggccagccggtggtgatggcgggcccgaccgcattcgtcttcgaaggggag
tggatcgcatga
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