Stenotrophomonas lactitubi: AB9L18_04275
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Entry
AB9L18_04275 CDS
T10939
Name
(GenBank) TrmH family RNA methyltransferase
KO
K03214
RNA methyltransferase, TrmH family [EC:2.1.1.-]
Organism
slab Stenotrophomonas lactitubi
Brite
KEGG Orthology (KO) [BR:
slab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
slab03009
]
AB9L18_04275
03016 Transfer RNA biogenesis [BR:
slab03016
]
AB9L18_04275
Ribosome biogenesis [BR:
slab03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
AB9L18_04275
Transfer RNA biogenesis [BR:
slab03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
AB9L18_04275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoU_methylase
SpoU_sub_bind
Motif
Other DBs
NCBI-ProteinID:
XGY86873
LinkDB
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Position
942073..942906
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AA seq
277 aa
AA seq
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MNDPWKNARRPSSRPPRATPLPPREGGTPPPPGRGNDELRLYGWNAVQALFAKRPQALRK
LYLVESLIPRMQPVLKWCVANRVGYRVVEEGDLNKLAATTHHEGLVADVLRAPVVPLAQW
LAELGEGPALALWLDGVGNPHNFGAILRSAAHFGAKALLLPASSTLALSGAAARVAEGGA
ESVPLVQLPEDAEAMAQLRAAGFGLAATLVDGGDDVFRASFPARLVYVMGAESEGMDRGL
ASQCDQQLSIPGSGAVESLNVASATAVLLAQWVSQRR
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
gtgaatgatccctggaagaatgcccgccgcccgtcgtcgcgaccgccgcgggccaccccg
ctgccaccgcgtgagggcggcaccccgccaccaccggggcgcggtaacgacgaactgcgc
ctgtatggctggaacgcggtgcaggccctgttcgccaagcgtccgcaggcgctgcgcaag
ctgtacctggtggagtcgctgattccgcgcatgcagccggtgctgaagtggtgcgtggcc
aaccgcgtgggctaccgcgtggtggaagagggcgacctcaacaagctggccgctaccacc
caccacgaaggcctggtggccgacgtgctgcgcgcaccggtggtgccgctggcgcagtgg
ctggccgaactgggcgaaggcccggcgctggcactgtggctggatggcgtcggcaatccg
cacaacttcggtgcgatcctgcgctcggccgcgcacttcggtgccaaggcgctgctgctg
ccggccagcagcacgctggcactgtccggtgcggccgcacgcgtggccgagggcggtgca
gagtcggtgccgctggtgcagctgcctgaagacgcagaagcgatggcgcagctgcgcgcg
gccggtttcggccttgccgcgaccctggtcgacggtggcgatgacgtgttccgcgcatcg
tttccggcccgcctggtctacgtgatgggcgcggaaagtgaaggcatggatcgcggcctg
gccagccagtgtgaccagcagctgtcgattcccggcagtggcgcggttgaaagcctgaat
gtcgcttccgccactgccgtgctgctggcgcagtgggtcagccagcgccgctga
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