Stenotrophomonas lactitubi: AB9L18_05165
Help
Entry
AB9L18_05165 CDS
T10939
Symbol
prpR
Name
(GenBank) propionate catabolism operon regulatory protein PrpR
KO
K02688
transcriptional regulator, propionate catabolism operon regulatory protein
Organism
slab Stenotrophomonas lactitubi
Brite
KEGG Orthology (KO) [BR:
slab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
slab03000
]
AB9L18_05165 (prpR)
Transcription factors [BR:
slab03000
]
Prokaryotic type
Helix-turn-helix
Other families
AB9L18_05165 (prpR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
PrpR_N
Sigma54_activ_2
AAA_5
HTH_8
Mg_chelatase
AAA_16
HTH_23
HTH_Tnp_1_2
HTH_17
AAA_2
Hydrolase
ATPase
HTH_11
HTH_Tnp_ISL3
ketoacyl-synt
AAA_7
AAA
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
XGY87045
LinkDB
All DBs
Position
complement(1146940..1148523)
Genome browser
AA seq
527 aa
AA seq
DB search
MYLPRSPLRHADADPGRPVIWTVSVSRLTGLLGDVIPEFDRRARIEQINLGFEEAVDVIG
QRLRREHCDVVIAGGSNAAWLRGRLDLPLVPIQANGFDLMEALARARRIAPRIGLVTHAS
DVPVFSSFQQSFGLDIEHRRFVTREDARDCIADLRANGIEVIVGTGMAIDHAEQAGLPGV
LLYSADSVRQAFEHALELTQTLARSADARPATRRRATPRADAHALLGDSNAMADVRAQIA
LYAPHDSTVLVTGETGTGKELVARQLHAASGRRGRFVALNCGAISESLLEAELFGYSDGA
FTGARRGGRVGLVEAADGGTLFLDEIGELPLPLQTRLLRVLEEREVLRVGATEPTPVDLR
VVAATLQSLEQRAAAGSFRRDLYYRLAALRIALPTLRARRSDIPLLTTHFFRELRGIDAP
LDAEALALLGAADWPGNVRELRNLVDRLRIHWQPGEGLIDAARLLQLAPELVNEGVAALP
VESNGKRPPRAQLEALLQEHRNDREGMAQALGVSRTTLWRWLRAEGL
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgtacctgccccgctcacccctgcgccacgccgatgccgaccccggccgcccggtgatc
tggaccgtcagcgtctcgcgcctgaccggcctgctgggcgatgtcattcccgaattcgac
cgccgcgcccgcatcgagcagatcaacctcggcttcgaggaagcagtggacgtgatcggc
caacgcctgcgccgcgagcactgcgacgtggtgatcgctggcggctccaacgcggcctgg
ctgcgcggccgcctggaccttccgctggtgccgatccaggccaacggtttcgatctgatg
gaagcgctggcgcgggcgcgccgcatcgccccacgcatcgggctggttacccacgccagc
gatgtgccggtgttcagcagcttccagcagagcttcggcctggacatcgagcatcgccgt
ttcgtcacccgcgaagacgcgcgcgactgcatcgccgacctgcgtgcgaacggcatcgag
gtgatcgtcggcaccggcatggccatcgatcatgccgaacaggcgggcctgccgggcgta
ctgctgtactcggccgattcggtgcggcaggccttcgagcacgcgctggaactgacccag
accctggcacgatcggcggacgcgcgcccggctacgcgccgacgggccacaccgcgcgcc
gatgcgcatgcgctgctcggcgacagcaacgcgatggccgacgtgcgcgctcagatcgcg
ctgtacgccccgcacgacagcaccgtactagtcaccggcgagaccggcaccggcaaggaa
ctggtagcgcggcagctgcatgcggccagcggccggcggggtcgattcgtcgcactgaac
tgcggcgcgatcagcgaatcgctgctggaggccgagctgttcggctacagcgatggcgcc
ttcactggtgcgcggcgcggtggtcgcgtcggcctggtcgaggccgccgatggcggtacg
ttgttcctggatgagatcggcgaactgccgctgccgttgcagacccgcctgctgcgcgtg
ctggaagaacgcgaggtgctgcgcgtcggtgcaaccgaaccgacgcccgtcgacctgcgc
gtggtcgccgccaccctgcaatcgctggaacagcgcgcggcggctggcagcttccgtcgc
gatctgtattaccggctggccgcgttgcgcatcgcgttgcccactctgcgcgcgcgtcgc
agcgatatcccgctgctgaccacgcacttcttccgcgaactgcgcggcatcgatgcaccg
ctggatgcagaagcgctggccctgctcggcgcagccgattggccgggcaatgtgcgtgaa
ctgcgcaatctggtggatcggctgcgcatccactggcagccgggtgaagggttgatcgat
gccgcgcgactgctgcagctggcgcctgagctggttaacgaaggcgtcgcggcactgcca
gtggaaagcaacggcaagcgaccgccgcgtgcgcagctggaggcgctgctgcaggaacac
cgcaatgaccgcgaaggcatggcacaggcgctgggcgtatcgcgcaccacgctgtggcgg
tggctgcgcgcggaggggttgtag
DBGET
integrated database retrieval system
