Stenotrophomonas lactitubi: AB9L18_05320
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Entry
AB9L18_05320 CDS
T10939
Symbol
gcvP
Name
(GenBank) aminomethyl-transferring glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
slab Stenotrophomonas lactitubi
Pathway
slab00260
Glycine, serine and threonine metabolism
slab00630
Glyoxylate and dicarboxylate metabolism
slab00670
One carbon pool by folate
slab00785
Lipoic acid metabolism
slab01100
Metabolic pathways
slab01110
Biosynthesis of secondary metabolites
slab01200
Carbon metabolism
Module
slab_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
slab00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
AB9L18_05320 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
AB9L18_05320 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
AB9L18_05320 (gcvP)
00670 One carbon pool by folate
AB9L18_05320 (gcvP)
Enzymes [BR:
slab01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
AB9L18_05320 (gcvP)
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Gene cluster
GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Aminotran_5
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
XGY87075
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Position
complement(1184486..1187353)
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AA seq
955 aa
AA seq
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MSQNTPSLRELEHHSAFVERHIGPNDAEIAQMLGVIGHASLDAMTDAIVPAKIKSPAPLA
LPESITEVQALAKIRAIADKNTVLRSFIGQGYYGTHTPNVILRNILENPAWYTAYTPYQA
EISQGRMEALINFQTLCADLTGMEIANASLLDEATAAAEAMTLAKRSAKSKSDTFFVHDA
VHPQTLELLRTRAEPMGIVLRVGTPAEALEAEAFGLLLQYPDTFGQVGDYKALVDAVHAR
GGLVAVATDLLALTLLAAPGEWGADIVVGNSQRFGVPFGFGGPHAAFMACRDAYKRSMPG
RLIGVSIDAQGNPAYRLTLQTREQHIRREKATSNICTAQVLLAVMASMYAVYHGPEGLTR
IARRTHRLAAILASALRTAGVQVGADFFDTLHVTGVDADAIHAKARAAGYNLRAIDSSSV
GISLDETTTRADIVAVGALFGANVDVDALDASTADALPAGLLRQSAFLTHPVFNTHHSEH
ELLRYLRSLADKDLAMDRTMIPLGSCTMKLNATAEMIPVTWPEFSQIHPLVPAEQALGYK
ELIDSLEAMLVECTGYDAVSLQPNSGAQGEYAGLLAIRAYHRSRGEDHRDICLIPDSAHG
TNPASAQMCGMKVVVTKTDANGNVDVEDIRLNAEKYSDRLAAIMMTYPSTHGVFEEEVVE
ICEIIHKHGGQVYTDGANMNALVGVAKPGKWGSDVSHLNLHKTFCIPHGGGGPGVGPCAV
KSHLAPFLPGKLGDNGPVGMVSAASFGSASILPISWMYIAMMGTEGLRKATQVAQLNANY
IAKRLAPHFKTLYTGRNGLVAHECILDVRPLEKTSGIGAEDVAKRLIDFGFHAPTLSFPV
AGTLMVEPTESESLHELDRFIDAMIQIREEITAIEDGRLDREDNPLKNAPHTATAVTASE
WTHAYPRELAAFPLPSLKLQKYWPPVARVDNVYGDKNVMCACIPVDAYKDDEVEA
NT seq
2868 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagaacaccccttccctgcgtgagctcgagcaccattcggcgttcgtcgagcgc
cacatcggccccaacgatgccgagatcgcgcagatgctcggcgtcatcggccacgcatcg
ctggatgcgatgaccgatgccatcgtcccggccaagatcaagtcgccggcaccgctggca
ctgccggagtcgatcaccgaagtgcaggcgctggcgaagatccgcgcgatcgccgacaag
aacaccgtgctgcgcagcttcatcggccagggctactacggcacccacacgccgaacgtg
atcctgcgcaacatcctggaaaaccccgcctggtacaccgcctacaccccgtaccaggcg
gaaatctcgcagggccgcatggaagcgctgatcaacttccagaccctgtgcgccgacctg
accggcatggaaatcgccaacgcctcgctgctggacgaagccacggccgctgctgaagcg
atgaccctggccaagcgctcggccaagtcgaagtcggacaccttcttcgtgcacgatgcc
gtgcacccgcagacgctggaactgctgcgtacccgcgccgagccgatgggcatcgtgctg
cgcgtgggcaccccggccgaagcgctggaagcagaagccttcggcctgctgctgcagtac
ccggacaccttcggccaggtcggcgactacaaggcgctggtcgatgccgtgcacgcgcgc
ggcggcctggtggccgtggccaccgacctgctggcactgaccctgctggccgctccgggc
gaatggggtgcggacatcgtggtcggcaacagccagcgtttcggcgtgccgttcggcttc
ggtggcccgcatgctgcgttcatggcctgccgtgacgcctacaagcgttcgatgccgggc
cgcctgatcggcgtctcgatcgacgcacagggcaaccctgcctaccgcctgaccctgcag
acccgcgagcagcacatccgccgcgagaaggccacctccaacatctgtaccgcacaggtg
ctgctggcagtgatggcctcgatgtacgccgtctaccacggtccggaaggcctgacccgc
atcgcccgccgcacccatcgcctggccgcgatcctggccagcgcgctgcgcaccgccggt
gtgcaggtcggtgccgacttcttcgacacgctgcacgtcaccggtgtcgacgccgatgcg
atccatgccaaggcccgtgctgccggctacaacctgcgtgcgatcgacagcagctcggtg
ggcatcagcctggacgagaccaccacccgcgccgacatcgtcgccgtgggcgcgctgttc
ggtgccaacgttgatgtggacgcgctggatgccagcaccgccgacgcgctgccggccggc
ctgctgcgccagtccgcgttcctgacccacccggtgttcaatacccaccacagcgagcac
gaactgctgcgctacctgcgttcgctggccgacaaggacctggcgatggaccgcacgatg
atcccgctgggctcgtgcaccatgaagctcaacgccaccgccgaaatgattccggtgacc
tggccggagttctcgcagatccacccgctggtgccggccgagcaggcgctgggctacaag
gaactgatcgattcgctggaagcgatgctggtcgagtgcaccggttacgacgccgtcagc
ctgcagccgaactccggcgcgcagggcgagtacgccggcctgctggcgatccgtgcctac
caccgctcgcgcggcgaagatcaccgtgacatctgcctgatcccggattcggcgcacggc
accaacccggcctcggcacagatgtgcggcatgaaggtcgtggtcaccaagaccgacgcc
aacggcaacgtcgacgtcgaggacatccgcctcaacgccgagaagtacagcgaccgtctg
gccgcgatcatgatgacctacccgtccacgcacggcgtgttcgaggaagaggtggtggag
atctgcgagatcatccacaagcatggcggccaggtgtacaccgatggtgccaacatgaac
gccctggtcggcgtggccaagccgggcaagtggggttcggatgtttcgcacctgaacctg
cacaagaccttctgcatcccgcacggcggcggcggcccgggcgttggcccgtgtgcggtc
aagtcgcaccttgccccgttcctgccgggcaagctgggtgacaacggcccggtcggcatg
gtcagcgccgccagcttcggcagcgcctcgatcctgccgatcagctggatgtacatcgcg
atgatgggcaccgaaggcctgcgcaaggcaacccaggttgcccagctcaacgccaactac
atcgccaagcgcctggccccgcacttcaagacgctgtacaccggtcgcaacggcctggtc
gcgcacgagtgcatcctggacgtgcgtccgctggagaagaccagcggcatcggtgccgaa
gacgtggccaagcgcctgatcgacttcggcttccatgccccgaccctgagcttcccggtg
gccggcacgctgatggtcgagccgaccgaaagcgaatcgctgcacgagctggaccgcttc
atcgacgcgatgatccagatccgcgaagagatcaccgcgatcgaagacggccgcctggac
cgcgaggacaacccgctgaagaacgcgccgcacaccgccacggcggtgaccgccagcgaa
tggacccacgcctacccgcgcgagctggccgccttcccgctgccgagcctgaagctgcag
aagtactggccgccggtggcacgtgtggacaacgtgtacggcgacaagaacgtgatgtgc
gcctgcatcccggtcgatgcctacaaggacgatgaagtcgaggcgtaa
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