Stenotrophomonas lactitubi: AB9L18_05455
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Entry
AB9L18_05455 CDS
T10939
Symbol
recO
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
slab Stenotrophomonas lactitubi
Pathway
slab03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
slab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AB9L18_05455 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
slab03400
]
AB9L18_05455 (recO)
DNA repair and recombination proteins [BR:
slab03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
AB9L18_05455 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
AB9L18_05455 (recO)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RecO_N
RecO_C
Motif
Other DBs
NCBI-ProteinID:
XGY87101
LinkDB
All DBs
Position
1218757..1219476
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AA seq
239 aa
AA seq
DB search
MLIEDDTGFVLHARAYRETSLLVEVLSAEHGRIGLLARGVSTAKGQVLRAALQPLQWIRF
SALQRGELAQLRGAEALDVAPRLLGQAMLAGFYLSELTLRLAPRQDPLPELYLAYGEARA
RLAVGAGLAWTLRRFERELLAALGVGFDLETASDGQPIDPAARYELDPQEGPQRLLSERG
GERRAAATGSALLALAADDEPDAADLASLRLPMRRVLAHHLGARGLKSWEMLEQLAPRR
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atgctgatcgaggacgacaccggcttcgtgctgcatgcgcgggcctatcgcgagaccagt
ctgctggtcgaggtattgagcgccgagcacggccggatcggcctgctcgcgcgtggcgtt
tccaccgccaagggccaggtgctgagagcggccttgcagcccctgcagtggatccgcttc
agcgcgctgcagcgtggcgaactggcccagctgcgtggtgctgaagcgctggatgtggcg
ccgcgcctgctcggccaggccatgctggccgggttctatttgagtgaactgaccctgcgc
ctggcgccgcgccaggatccgttgccggagttgtacctggcctacggcgaagcgcgtgcg
cgcctggccgtgggtgccggcctggcctggaccctgcgtcgtttcgaacgcgagctgctg
gcggcgctgggcgtgggcttcgatctggagaccgccagcgatggccagccgatcgacccg
gcggcgcgctatgagctggacccgcaggaaggaccgcagcgcctgctcagtgagcgtggc
ggcgagcgtcgcgcggcggctacgggttcagcactgttggccctggcagctgacgacgag
ccggacgccgccgatctggccagcctgcgcctgccgatgcggcgggtgctggctcatcac
cttggcgcgcgcgggttgaagtcgtgggagatgctggagcagctcgcgcccaggcgttga
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