Stenotrophomonas lactitubi: AB9L18_05780
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Entry
AB9L18_05780 CDS
T10939
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
slab Stenotrophomonas lactitubi
Pathway
slab03030
DNA replication
slab03430
Mismatch repair
slab03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
slab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AB9L18_05780 (holA)
03430 Mismatch repair
AB9L18_05780 (holA)
03440 Homologous recombination
AB9L18_05780 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
slab03032
]
AB9L18_05780 (holA)
03400 DNA repair and recombination proteins [BR:
slab03400
]
AB9L18_05780 (holA)
Enzymes [BR:
slab01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AB9L18_05780 (holA)
DNA replication proteins [BR:
slab03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AB9L18_05780 (holA)
DNA repair and recombination proteins [BR:
slab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AB9L18_05780 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta
HP_1247_M
DNA_pol3_delt_C
Motif
Other DBs
NCBI-ProteinID:
XGY87162
LinkDB
All DBs
Position
1285411..1286448
Genome browser
AA seq
345 aa
AA seq
DB search
MELRPEQLAGQGADTALAPVYLIAGPETLRVLEAADAVRARARAAGIDEREVFDADGRDF
DWNQLDASFHAPSLFSARRLVEVRLPSGKPGKEGGEVISQFCANPAPDVILMITANEWSK
AHQGKWAEAVNRVGVLSVAWAIKPHELPDWIERRLRSRGLRAEPAAVQRLAERVEGNLLA
AAQEIDKLALLADGQTLDVERMESLVADAARYDVFRLVESTFSGQPQAVLRMLAGLRGEG
EAVAALMPIVIRELLAGAGLARVQARGGNLAAEMKSRGIWESRQAPYKRALQRHPEGKRW
ERFVAEAGLVDRIAKGRADGDAWLALERLLVAVAEARAVRLLARA
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atggaactgcgaccggaacagctggccgggcagggcgctgacacggcgctggcgccggtc
tatctgatcgccggtccggaaacactgcgtgtgctggaggcagccgacgccgtgcgtgcc
cgcgcacgcgcggccggcatcgacgagcgcgaagtgttcgacgccgatggccgcgatttc
gactggaaccagctcgacgccagttttcacgcccccagcctgttcagtgcccgccgcctg
gtggaagtgcgcctgcccagtggcaagccgggcaaggaaggtggcgaggtgatcagccag
ttctgcgccaatccggcgccggacgtgatcctgatgatcaccgccaatgaatggagcaag
gcccaccagggcaagtgggccgaggcggtgaaccgtgtcggcgtgctgtcggtggcctgg
gcgatcaagccacacgagctgccggactggatcgagcggcgcctgcgcagcagggggctg
cgcgccgagcctgccgccgtgcagcgtctggccgagcgcgtggaaggcaacctgctggcc
gcggcgcaggagatcgacaagctcgcactgctggccgatggccagaccctggacgtggaa
cggatggaatcgctggtggccgatgccgctcgctacgacgtgttccggctggtggaatcc
accttctccgggcagccacaggcggtgctgaggatgctggccggtctgcgcggcgaaggc
gaggccgtggccgcgctgatgccgatcgtgatccgcgaactgctggctggtgccggcctg
gcacgggtccaggcacgcggcggcaacctggctgcggagatgaaatcccgcggtatctgg
gaatcgcggcaggcaccctacaagcgtgcgctgcagcggcatccggaaggcaagcgctgg
gagcgtttcgtggccgaagccgggctggttgaccgcatcgccaaggggcgcgccgacggc
gatgcctggctcgcgcttgagcgcctgctggtggcggtggccgaggcgcgcgcggtacgg
ctgctcgcccgggcctga
DBGET
integrated database retrieval system
