Stenotrophomonas lactitubi: AB9L18_06090
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Entry
AB9L18_06090 CDS
T10939
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
slab Stenotrophomonas lactitubi
Brite
KEGG Orthology (KO) [BR:
slab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
slab03009
]
AB9L18_06090 (rimO)
Enzymes [BR:
slab01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
AB9L18_06090 (rimO)
Ribosome biogenesis [BR:
slab03009
]
Prokaryotic type
ribosomal protein modification factors
AB9L18_06090 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
CLP1_P
YajR_YAM
PrmA
Motif
Other DBs
NCBI-ProteinID:
XGY87221
LinkDB
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Position
1367258..1368619
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AA seq
453 aa
AA seq
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MSQLNPKVGFVSLGCPKALVDSERILTQLRSEGYDIVPSYDSADVVVVNTCGFIDSAVTE
SLDAIGEAMNQNGKVIVTGCLGKRPEQIREAYPNVLAVSGPQDYQSVMEAVHAALPPKHD
PFVDLVPDYGIKLTPRHYAYLKISEGCNHHCSFCIIPSMRGKLVSRPVDDVLREAERLVR
GGVRELLVVSQDTSAYGVDVKYAEKMWRDKAYQTRLKALCEGLSELDAWVRMHYVYPYPH
VDDVVPLMAENRILPYLDIPFQHASPRILRLMKRPGAVEKTLERVQNWRRIAPDITVRST
FIVGFPGETEAEFEELLSFLDEAQLDRVGAFAYSPVEGATANNLPDPVPEEVKQERLARF
MEKQAQISASRLEAKIGTVQQCLVDAIEGDIAVARSKADAPEIDGLVHIQNADQVALRVG
EFVDVEITESDEHDLYGDALPPTTRPAFDLKVL
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagctgaaccccaaagtcggcttcgtcagccttggctgcccgaaggccctcgtc
gattccgagcgcatccttacccagctgcggtcggaaggttacgacatcgtcccgtcctac
gattcggccgacgtggtggtggtcaacacctgcggcttcatcgattcggcggtgaccgaa
tcgctggatgcgatcggcgaggcgatgaaccagaacggtaaggtcatcgtcaccggctgc
ctgggcaaacgcccggagcagatccgtgaggcgtacccgaacgtgctggcggtgtccggg
ccgcaggattaccagagcgtgatggaagccgtgcacgcggcgctgccgcccaagcacgac
ccgttcgtggatctggtgccggactacggcatcaagctgaccccgcgtcactacgcctac
ctgaagatttccgagggctgcaaccaccattgcagcttctgcatcattccgtcgatgcgc
ggcaagctggtctcgcgcccggtcgatgacgtgctgcgcgaagccgagcgcctggtgcgt
ggcggtgtgcgtgagctgctggtggtttcgcaggacacctctgcctacggcgtggatgtg
aagtacgccgagaagatgtggcgcgacaaggcttaccagacccggctgaaggcactgtgc
gaaggcttgtccgagctggatgcgtgggtgcgcatgcactacgtctatccgtatccgcac
gtcgatgacgtggtgccgctgatggccgagaaccgcatcctgccgtacctggacatcccg
ttccagcacgccagcccgcgcatcctgcgcctgatgaagcgccccggcgcggtcgaaaag
accctggagcgcgtgcagaactggcgccgcatcgcgccggacatcaccgtgcgttcgacc
ttcatcgtcggtttcccgggcgagaccgaggccgagttcgaagagctgctgtccttcctg
gacgaagcgcagctggaccgcgtcggtgcgttcgcctactcgcccgtcgagggtgccacg
gccaacaacctgccggacccggtgccggaagaagtgaagcaggaacgactggcgcgcttc
atggaaaagcaggcgcagatttcggcctcgcgtctggaagccaagatcggcacggtgcag
caatgcctggtcgatgccatcgaaggcgatatcgccgtggcccgttccaaggccgatgcg
ccggaaatcgacggtctggtgcatatccagaacgccgaccaggtggcgctgcgcgtgggt
gagttcgtcgacgtggaaatcaccgagagcgacgagcacgacctctacggcgatgcactg
ccgccgaccacgcgcccggccttcgacctcaaggtgctgtga
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