Stenotrophomonas lactitubi: AB9L18_06370
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Entry
AB9L18_06370 CDS
T10939
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
slab Stenotrophomonas lactitubi
Brite
KEGG Orthology (KO) [BR:
slab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
slab03016
]
AB9L18_06370 (truB)
Enzymes [BR:
slab01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
AB9L18_06370 (truB)
Transfer RNA biogenesis [BR:
slab03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AB9L18_06370 (truB)
Prokaryotic type
AB9L18_06370 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Pus10_C
Motif
Other DBs
NCBI-ProteinID:
XGY87273
LinkDB
All DBs
Position
1430197..1431105
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AA seq
302 aa
AA seq
DB search
MTRIQFRRLDGILLLDKPTGMSSNAALQVARRLFRAEKGGHTGSLDPLATGLLPLCFGEA
TKIAGLLLGSAKAYDAEIVLGQTTDTDDSEGQVLLERPVPAISPETLQAAIAPLLGDILQ
RAPIYSALKQGGEPLYVKARRGDAIEAPERQVKVHAIEILEQQPERLRLRVTCGSGTYIR
SLARDLGETLGCGAHISALRRLWVEPFHEPAMVTLEQLRALVEAQDETAMDALLLPLAAG
LSEYPRVDLDAEQVQRFCVGQRQRNPSWPRGLVAVFGPGSVAQGLGQVDDGGLLAPQRRF
NL
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atgacccgaattcagttccgccgcctggatggcatcctgctgctcgacaagccgaccggc
atgagctccaacgccgcgctgcaggtcgctcgtcgcctgttccgtgcggaaaagggcggc
cacaccggcagccttgacccgctggccaccggcctgttgccgctgtgcttcggcgaggcc
accaagatcgccggcctgctgctgggctcggccaaggcctacgacgccgagatcgtgctg
ggccagaccaccgataccgatgactcggagggccaggtgctgctcgagcggccggtgcct
gcgatcagtcccgagaccctgcaggcggcgatcgcgccgctgctgggcgacatcctgcag
cgtgcgccgatctattccgcgctcaagcagggcggggaaccgctttatgtgaaggcccgc
cgaggcgacgccatcgaggcgcccgagcgccaggtcaaggtccatgccatcgagatactg
gagcagcagcccgagcggctgcggctgcgggtcacctgcggctcgggcacctatatccgc
agtctggcccgtgaccttggtgaaacgctgggctgcggggcgcacatcagtgccctgcgt
cgcttgtgggtggagccgttccacgaaccggcgatggtcaccctggagcagctgagggcc
ttggtggaagcgcaggacgagaccgccatggacgcgctgctgctaccgcttgcagccggt
ctgtccgagtatccccgggtcgacctggacgccgagcaggtccagcgtttctgcgtaggc
cagcgccagcgcaacccttcctggccacgtggtctggtggccgtatttggtcccggatcg
gtggcgcagggcctgggccaggtcgatgatggcggtctgctggccccgcagcggcgcttc
aacctctga
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