Stenotrophomonas lactitubi: AB9L18_07000
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Entry
AB9L18_07000 CDS
T10939
Name
(GenBank) pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
slab Stenotrophomonas lactitubi
Brite
KEGG Orthology (KO) [BR:
slab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
slab03009
]
AB9L18_07000
Enzymes [BR:
slab01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
AB9L18_07000
Ribosome biogenesis [BR:
slab03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
AB9L18_07000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
Motif
Other DBs
NCBI-ProteinID:
XGY87391
LinkDB
All DBs
Position
complement(1552279..1554000)
Genome browser
AA seq
573 aa
AA seq
DB search
MSDTPRKPSLNKLSLKREATSEQFKLEERLHKVLAQAGLGSRRALEQRIAEGLVKVNGEV
AQTGMSVKSGDKIELDGRGFVATALAEPSRVLVYNKPEGEVTTREDPEGRPTVFESLPAL
KGARWIAVGRLDINTTGLLLATTDGELANAMMHPSFEVEREYVVRVRAPEGEDKVPDAVV
DRLTRGVALEDGPAKFDEIERIGGTDSHDWFRVVVKEGRNREVRRLWESQGCQVSRLKRT
RYGKVSLPRELARGQSVELPGSQVEALRAELKLEEGAPSALTLQPVIGQRRAAKTTVRVR
EGGRGNAYVNGHNTADEGRELRRFDNVREDRGRGRGGKGGGGFKGGLTVSGEAAAKQAQR
PFKQRAPKNDRSLPEGNPAAFRTWYVPDGVSTGPSGHRNAGPGARGPGARGPGAGAGGQG
RPYGKPKGPGAGAGGGQGRGGYGGEGRGGYGGEGRGGAGGQGRPAGAGNRSQGQGNKHPY
GHPGNAPSFPSDHANPGFSPYGTSRPAGNGRPGGNANARPGGNRGPGGPGGNRGPGGPGG
NRGPGGPGGNRGPGGPGGNRGPGGPRRSGPRGG
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacaccccccgcaagccctcgttgaacaagctttcgctcaagcgcgaagccacg
tccgaacagttcaagctggaagaacgcctgcacaaggtcctggcccaggccggcctcggc
tcgcgtcgtgcgctggaacagcgcatcgctgaaggcctggtcaaggtcaacggtgaagtc
gcgcagaccggcatgtcggtcaagagcggcgacaagatcgagctcgacggtcgcggtttc
gtcgccaccgcgctggccgaaccctcgcgcgtgctggtctacaacaagccggaaggcgaa
gtgaccacccgcgaagacccggaaggccgcccgaccgtgttcgaatccctgccggcgctg
aagggtgcccgctggatcgccgtcggccgcctggacatcaacaccaccggcctgctgctg
gcgaccaccgacggtgagctggccaacgccatgatgcacccctcgttcgaggtcgagcgc
gagtacgtggtgcgcgtgcgtgccccggaaggcgaggacaaggtgcctgacgccgtcgtc
gaccgcctcacccgcggtgtcgcgctggaagatggcccggccaagttcgatgagatcgaa
cgcatcggcggtaccgattcgcacgactggttccgcgtcgtggtgaaggaaggccgcaac
cgcgaagtgcgccgcctgtgggaatcgcagggctgccaggtcagccgcctcaagcgcacc
cgctacggcaaggtcagcctgccgcgcgaactggcccgcggccagtccgtcgaactgccg
ggcagccaggtcgaagcgctgcgcgccgaactgaagctggaagaaggcgcgccgtcggcc
ctgaccctgcagccggtgatcggccagcgtcgtgccgccaagaccaccgtgcgcgtgcgc
gaaggtggccgcggcaacgcctacgtcaacgggcacaacaccgctgatgaaggtcgcgaa
ctgcgtcgcttcgacaacgtccgcgaagaccgcggccgcggtcgcggcggcaagggtggc
ggcggtttcaagggcggcctgacggtcagcggtgaagccgcagccaagcaggcgcagcgc
ccgttcaaacagcgcgcgccgaagaacgaccgctcgctgccggaaggcaacccggccgca
ttccgtacctggtacgtgcctgatggcgtcagcaccggcccgagcggccaccgcaatgcc
ggtccgggcgcacgtggccccggcgcgcgtggtccgggtgcaggtgcaggcggccagggc
cgtccgtacggcaagccgaagggtccgggcgcaggcgccggtggcggtcagggtcgcggc
ggctacggcggtgaaggtcgtggtggctacggtggagaaggtcgtggtggcgccggcggc
cagggtcgtccggccggtgcgggcaaccgctcgcagggccagggcaacaagcatccgtac
ggccatccgggcaatgcccccagcttcccgtccgaccacgccaatcccggcttcagtccg
tacggcacctcgcgtccggccggcaacggtcgtccgggcggcaatgcgaatgcacgtccg
ggtggtaaccgtggtccgggtggtccgggcggcaatcgcggtccgggtggccccggtggc
aatcgtggtcccggcggcccgggtggcaaccgcggcccgggtggccccggcggcaaccgt
ggcccgggtggcccgcgtcgcagcggcccgcgcggcggctga
DBGET
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