Stenotrophomonas lactitubi: AB9L18_08925
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Entry
AB9L18_08925 CDS
T10939
Name
(GenBank) RHS repeat-associated core domain-containing protein
Organism
slab Stenotrophomonas lactitubi
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
TEN_YD-shell
DUF6531
Motif
Other DBs
NCBI-ProteinID:
XGY87755
LinkDB
All DBs
Position
1967122..1971771
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AA seq
1549 aa
AA seq
DB search
MFGRTMKLACVALTMVALGCAAPLAAHAQESKTTWRISQPSGNSTQYKTQQQAVQAIKSL
PAPSPFPPELQFGWQSVNSIKSKVVDLEGNTSITYWMGKSQPSDPDWSYLSTAIFPTEEA
MVAAYLAKVQEANPVCPGAAVTPTSEWYALSPDMEGTIETRDFQATYMIGDNTAESPCTP
YPSDAHMTRTRRLNCPVPLTQWSNKHEACVSEEFVATITSKTTQCEKDGGSAGCPDEDQA
PCNGTVGNPCDVKTGEKYEIAQDFDLGWIALTRYYHSGISTSSGGFGYGWTHSLGAQLAL
DGAGGAGIVEATGFQRAFKKIGQVYEAADSSGDRLVQNGNWTLYASDAISTFDDAGRLAA
KRFVDGTSLTFVYDDSQRLAAVMHSSGRTLEFVYQSNDYEALISSVLVAGVPQASYTYTA
HGQVATVTYAGGGVRTYHYENQDFPQHLTGITAEDGRRYSTFTYDTIGRVISSQHAGGAD
GVTLAYSPSGGAVVTDALGHQTDYTLTPGGDSAPPRKVSGTTDAQGSISRTYYDGAVDFR
RRLDTYTDRRGVQTKHTYSEGVDAVTGRPVNTHTITDAVGLPEQRVVQTTRDSVTNAVLA
TTIAQRETRTAYNSRRQPVSVTLKDLASGQTRTATYTYCEAADVAAAGSCPMEGLLKSVD
GARTDVADVSTYAYYAADDAGCATNGACTYRKGDLRSVTNALGQTVETLAYDAHGRPLSV
KDANGVVTDYAYHARGWPTSVTVRGATTAEDRSTQISYWPTGQVQQITEPDGNSVIYVYD
AAQRLTDIEDNAGNTVHYTLDNAGNRLKEDTLDAGGTLRRTLARTFNAIGQLTALKDAGN
HATGFTYDANGNPQTVTDALQRVSSQQYDPLNRLARTLQDVGGVAAEIRSQYNALDQVTQ
VTDPKGLHTTYAYNGFGDLTGQVSPDTGTSSFTVDVAGNRKTATDARGITATYSYDALNR
LIGIAYPDPNLDVGYSYDVAPAACAADERFAKGRLGQVLHANGSTQYCHDRFGQVTRKVQ
TVNGVVSTLRYAYSKSGRLTALTYPDGSVADYVRDTQGRVSQIGLTRTGQPRQIVVNNVS
YAAFGPATGWTYGNGRQLQRPLDLDYRPQAVHDPATGGLSLSYGYDPVGSITELKNGAGS
EVLAKYAYDSLGRLTQTQDGATGTPIETYGYDATGNRTSLTTSAGTVSYTYPAASHRLIA
VDGEVRNHDAVGNTTSIGSKTFTYNDANRMNAVKQGSAVLESYAYNHRGERVVRTPIGGA
AQVTLYDEAGQWLSNYSATGQAQQQAIWLDNYPVALINVPSAGVPELVYVQPDHLGTPRV
AIDPARNVTIWEWSNKSEAFGDQAPANDPDGDGVAFVLSLRFPGQQATDASGLFYNYQRE
YDPAVGRYSQSDPIGLLGGVGTFGYVSGNPVRLVDPLGMAGKPVDLGDGYTGRVDTFNYR
GDASFEIHVLGPRGNEVGVYGPDGWINKHGFKGAPSGLPSGVEDQCKTVSADYSRRIGVH
MGRAEKRASKLKSVLRGWPILGTLINEMSTPSPKRICEDAPDYPGCEDM
NT seq
4650 nt
NT seq
+upstream
nt +downstream
nt
atgttcggacggacaatgaagctggcgtgtgtggcgctgacgatggtcgcgcttggctgc
gcggccccccttgccgcgcatgcgcaggagagcaagacaacctggcgcatctcccagcca
agcgggaattcgacgcagtacaagacccaacagcaggcggtgcaggcgatcaagagcctg
cccgcgccgagtccgttcccgcctgagctccagttcggttggcagtccgtcaattcgatc
aagtcgaaggtcgtggacctggagggaaatacctcaatcacgtactggatgggcaagtcc
cagccctccgaccctgattggtcgtatctgagtaccgctatattcccgaccgaagaggcg
atggttgccgcctacctggccaaagttcaggaggcaaatcctgtatgtcccggagcggcg
gtcaccccgacgagtgaatggtatgcactcagccccgacatggaagggacgatcgagacc
cgcgatttccaagccacgtacatgatcggcgacaacacagccgagtcgccgtgcacgccc
tatccaagcgatgcccatatgacgcggacccggcgtctgaactgcccggtccccctcacc
cagtggtccaacaagcatgaagcgtgtgtcagcgaagagttcgtagcaaccatcacctcc
aagacgacgcagtgcgaaaaggatgggggtagcgccggctgccccgatgaggatcaggcc
ccgtgcaacggcaccgtaggcaacccctgcgacgtgaagaccggcgagaagtacgagatc
gcgcaggacttcgatctgggctggattgcactgacgcgctattaccattcgggaatatcc
acctcgtccggagggttcggctacggctggacacattcgcttggagcgcaactggcactg
gatggggcgggtggcgcaggtatcgttgaagccactggtttccagcgcgccttcaagaag
atcgggcaggtctacgaggccgccgacagcagtggcgatcgcctggtccagaatgggaac
tggacgctgtacgcgtccgacgccatttcgacgttcgacgatgcgggtcggctcgccgcg
aagcgctttgtggacggcacctcgctcaccttcgtctatgacgatagccagcgcctcgct
gccgttatgcacagcagcggccgtacgcttgaattcgtctatcagtccaacgactacgaa
gccctgatcagctccgttctggtcgcgggcgtaccccaggcgagctacacctataccgcg
catgggcaggtcgctaccgtcacctacgcgggcggcggggtgcgcacctatcactacgag
aatcaggatttcccccagcacctgaccggcattaccgccgaggatgggcgccgctacagc
accttcacctatgacaccatcggtcgcgtcatttcgagccagcacgcgggtggcgctgat
ggcgtaacccttgcctacagccccagtggcggtgcggtggtcaccgatgcattgggccat
cagaccgattacacgctgacgcccggtggcgacagcgcgcctccccgcaaggtgtcgggc
acgaccgatgcccagggttcgatcagccgcacctactatgacggcgcggtcgatttccgc
cggcgtctggatacctatacggaccggcgcggcgtccagaccaagcacacttacagcgaa
ggcgtcgacgcggtgacgggccgaccggtcaacacccataccattaccgatgcagtcggc
ctacctgagcagcgtgttgtgcagaccacgcgcgacagtgtgaccaacgcggtgctggct
acgaccatcgctcagcgtgagacgcgcaccgcctacaactcgcgccgacaaccggtgagc
gtgaccctgaaggacctggcgtccgggcagacgcgtacggccacgtatacctattgcgag
gccgcggatgtagccgcagcgggcagttgccccatggagggactgctgaagagcgtggat
ggcgcgcgcactgacgtggccgacgtcagcacctatgcctactacgccgcagacgacgca
gggtgcgcgaccaatggggcctgcacctatcgcaagggcgacctgcgcagcgtcaccaat
gcactcggtcagacggtggagacgttggcctacgacgcccacgggcgaccgttgtcggtg
aaggatgccaatggcgtggtcaccgactacgcctaccatgcccgcggctggcccacctcg
gtgaccgtacgcggcgccaccaccgccgaggatcgatccacccagatcagctactggccc
accggtcaggtgcaacagatcaccgagcccgatggcaacagcgtgatctacgtgtatgac
gctgcacaacgactgaccgacatcgaggacaacgctggcaacaccgtccactacacgctg
gacaatgccggcaatcgactgaaggaggacactctggatgcgggcggcaccctgcgccgc
actctggcacgcaccttcaacgcgattggccagcttacggcgctgaaagacgccggcaac
cacgccactggcttcacctacgatgcaaacggcaacccgcagacggtaaccgacgccctg
cagcgcgtctccagccagcagtacgatccgctgaaccgactggctcggacgctgcaggac
gtgggtggcgtggcagcggagatccgtagccagtacaacgcgctggaccaggtcacccag
gtgaccgaccccaagggcctgcacaccacctacgcctacaatggtttcggcgatctgacc
ggccaggtcagcccggacaccggtaccagcagcttcaccgtggatgtggctggcaaccgc
aagaccgccaccgatgcgcggggcatcaccgctacctacagctacgacgcgctcaaccgc
ctgatcggcatcgcctacccagaccccaatctggatgtgggctatagctatgacgtggca
ccggctgcctgcgccgccgacgagcgctttgccaaggggcgcctggggcaggtgttgcac
gcgaatggcagcacccagtactgccatgaccgcttcggccaggtcacccgcaaggtgcag
accgtcaacggtgtcgtcagcacgttgcgatatgcctacagcaagtccggccgcctgacc
gcgttgacctaccccgacggcagcgtggccgactacgtacgtgacacccagggccgtgtc
agccagattggcctgacgcgcaccggccagccgcgccagatcgtggtgaacaacgtgagc
tatgcagccttcggcccggcgaccggttggacctatggcaacggccgtcaattgcagcgg
ccgctggacctggactaccgtccgcaggccgtgcatgatccggcaacaggtgggctgtcg
ctgagctatggctatgatccggtgggttcgatcaccgagctgaagaacggcgcagggtcc
gaagtgctggccaagtacgcctacgacagcctgggccgcctgacccagacccaggacggc
gcgaccggcacgccgatcgaaacctacggctacgacgccaccggcaaccgcacctcgctg
accacttcggcaggaacggtcagctacacctatccagcagccagccaccggttgatcgcg
gttgatggcgaggtgcgtaatcatgacgcggtgggtaacaccaccagcatcggcagcaag
acattcacctataacgatgccaaccggatgaacgcggtgaagcagggcagcgccgtgctg
gaaagctatgcgtacaaccatcgcggcgagcgcgtggtgcgtacaccaataggtggggca
gcacaggtcaccctgtatgacgaggcagggcagtggctaagcaactattcggccacgggg
caggcgcagcaacaggcgatctggctggacaactatccggtggcactgatcaatgtgccg
agcgcgggcgtacccgaactggtctacgtccaaccggaccatttgggtacgccgcgcgtg
gcaatcgatccggcacgcaatgtgacgatttgggagtggagcaacaaaagcgaggccttt
ggcgatcaggcgccggccaatgatccagatggcgatggcgtagcttttgtgctatcgctg
cgcttcccggggcagcaggcaacggatgcgagtgggttgttctacaactaccagcgcgag
tatgacccggcggtgggacggtattcgcagagcgatccgattggattgctcggtggcgtg
ggcaccttcggctacgtcagcggtaatcccgtcaggcttgttgaccccctgggtatggct
gggaagccggttgatctcggagatggctatacagggcgtgttgacacattcaactatcgt
ggcgatgcgtcctttgaaattcacgttcttggacctcgcggaaatgaagttggcgtctac
gggcccgacggctggataaataagcatggattcaaaggcgctccttcaggtctgcctagt
ggtgtagaggatcagtgcaagacagtttccgctgactactctcgtcgaattggagtccat
atgggacgagccgagaagcgagcgtcgaaattgaaatcggttcttcgtggctggcctata
ctggggacgcttataaacgaaatgtcaacgccgagcccgaagagaatttgtgaggatgcc
cccgactatcccggctgtgaggacatgtaa
DBGET
integrated database retrieval system
