Stenotrophomonas lactitubi: AB9L18_09960
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Entry
AB9L18_09960 CDS
T10939
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
slab Stenotrophomonas lactitubi
Pathway
slab03420
Nucleotide excision repair
Brite
DNA repair and recombination proteins [BR:
slab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AB9L18_09960
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AB9L18_09960
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
XGY87954
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Position
2196384..2199035
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AA seq
883 aa
AA seq
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MSNTPFGESSCAAAASGCVEVRGAREHNLRNVDVSIPRNALVVFSGVSGSGKSSLAFGTV
FAEAQRRYFESVAPYARRLIDQAGVPDVDAIDGLPPAVALQQQRGASNARSSVGSVTTLS
SLVRMMYSRAGAYPANQPMLYAEDFSPNTPQGACSTCHGLGHVYEVTEALMVPDPSLSIR
ERAIASWPPAWHGQNLRDILVTLGYDIDIPWKKLPKKDREWILFTEETPTVPVYAGFTPA
ETRAALKRKLEPSYMGTYTGARRYVLHTFANTQSALMRKRVSRYMEGKLCPACHGKRLKP
EALSVTFAGVDIGEFMRLPLDQLADLLEPIAQGDFSAHRRGERTSRSATRRDRTTRAASG
RPVHASAPDVRLTSALSEEKRLAAQRLAGGVMARVHQLRGLGLGYLSLDRATPTLSAGEL
QRLRLATQLSSLLFGVLYVLDEPSAGLHPADSQALYDALDRLRDGGNSVFVVEHDLELMR
RAQWLVDVGPEAGEHGGRVLYSGEPDGLRHVQDSRTALYLFDQVPAPASRQRSAGGWLEL
KGIHRHNLQGVDAQLPLGLLTAVTGISGSGKSSLMAQALPELMLLHLGHEPADDGAEGTP
TDGPTVIETTRGQLAGDVDAIQRVVQVDQKPIGRTPRSNLATYTGLFDHVRKLFAATPAA
RRRRFDAGRFSFNVAKGRCETCEGEGFVSVELLFMPSVYAPCPTCHGARYNEATLAVLWN
DRNIAEVLQMTVEQAHAFFIEEDAIARPLQLLKEIGLGYLRLGQPATELSGGEAQRIKLA
TELQRSQRGRTLYVLDEPTTGLHASDVDRLLVQLQRLVEVGNTVVMIEHDMRAVAQADWV
IDLGPGAGAAGGTIVAKGTPQQVARAKGSRTAPFLARELGQGG
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacaccccctttggcgaatcgtcatgtgcagccgccgccagcggctgcgtcgag
gtgcgcggcgcgcgcgagcacaacctcaggaatgtcgatgtctccattccgcgcaatgca
ctggtggtgttctctggagtatcgggctccggcaagtcatcgttggccttcggtaccgtc
ttcgccgaggcgcagcggcgctacttcgagtccgttgcgccgtatgcacggcgcctgatc
gaccaggcgggcgtgcccgatgtggatgccatcgacggtctgccgccggcggtagccctg
cagcagcagcgcggcgccagcaatgcacgttcctcggtgggcagtgtcaccacgctgtcc
agcctggtgcgcatgatgtactcgcgtgcaggcgcatacccggccaaccagcccatgctg
tacgccgaggacttctcaccgaacacgccacagggcgcctgcagcacctgccacggcctt
gggcacgtctacgaggtgaccgaagcgctgatggttccggatccgtcgctgagcatccgc
gaacgcgccatcgcctcctggccgccggcatggcatggccagaacctgcgcgacatcctg
gtcacgctcggctacgacatcgacataccgtggaagaagctgccgaagaaggaccgggag
tggatcctgttcaccgaggagacgccgaccgtgccggtctatgccggcttcacgcccgcc
gaaacccgtgccgcgctcaagcgcaagctggagcccagctacatgggcacgtataccggc
gcccgtcgctacgtactgcacacgtttgccaatacccagagcgcgctgatgcgcaagcgg
gtttcgcgctacatggaaggcaagctgtgcccggcctgtcacggaaagcgcctgaagccg
gaggcgctctcggtcaccttcgcaggcgtggacatcggcgaattcatgcgccttccgctg
gatcaactggcggacctgctggagcccatcgcgcagggcgatttcagcgcacaccgccgg
ggtgaacgcaccagcagaagcgccacccgccgcgaccgcaccacgcgggcagcgagcggt
cgtcctgtccatgcttcggcccccgacgtacggctgacctctgccctgtcggaggagaaa
cgtctggctgcacagcggctcgcaggcggtgtcatggcgcgtgtacaccagctgcgaggc
ctgggcttggggtacctctcgctggatcgcgccacgccaacgctatcggctggcgaacta
cagcgtctgcggctggccacccagctcagctccttgctgtttggtgtgctgtacgtgctc
gatgagccctcggccggcctgcatcccgccgacagtcaggcgctgtacgacgcgctggac
cggctgcgtgacggcgggaactcggtcttcgttgtcgaacatgatctggagctgatgcgc
cgcgcgcagtggctggtggacgtcggccctgaggcgggtgagcatggcgggcgcgtgctc
tacagcggcgagccggatggtctgcggcacgtacaggattcacgcacggccctgtatctg
ttcgaccaggtgcctgcacctgccagccggcaacgcagcgctgggggttggctggaactg
aagggcatccaccgccacaacctgcagggtgtggatgcgcagctgccgctggggctgctg
accgcagtgaccggcatttcgggctccggcaagtccagcctgatggcgcaggcactgcct
gagctgatgctgctgcacctggggcatgagcccgcagacgatggagcggagggcacgccc
acggacgggccgaccgtgatcgaaaccacgcgaggccagttggcaggtgatgtagacgcc
atccagcgggtagtgcaggtggaccagaagccgatcggccgcacgccacgctccaatctg
gccacctataccgggctgttcgaccacgtgcgcaagctgtttgcggcgacgcccgccgcg
cgccgccgtcgtttcgatgcgggccgcttttccttcaacgtggccaagggcagatgcgag
acctgcgagggcgagggattcgtcagcgtcgagctgctgttcatgcccagcgtctatgcg
ccttgccccacctgccacggcgcccgctacaacgaggccacgctggcggtgctgtggaat
gaccgcaacatcgccgaggtcctgcagatgacggttgagcaggcgcatgcgttcttcata
gaggaggatgccattgcccgtccgctgcagttgttgaaggagatcggcctggggtacctg
cgactgggccagccggccacggaactgtcaggcggcgaagcacaacgtatcaagctggcg
accgagctgcagcgcagccagcgtgggcgcacgctttacgtgctggacgagcccaccacc
ggcctacatgcgtcggacgtggaccggctgctggtccagctgcagcgactggtcgaagtg
ggaaatacggtggtgatgatcgagcatgacatgcgtgctgtcgcgcaggcggattgggtg
atcgacctcgggccgggtgcgggcgctgcgggtggcaccattgtggcgaagggaacgccg
caacaggtggcccgcgccaaaggcagcaggacggcgcctttccttgcgcgggagctgggg
cagggcggatga
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