Stenotrophomonas lactitubi: AB9L18_10275
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Entry
AB9L18_10275 CDS
T10939
Name
(GenBank) type I secretion system permease/ATPase
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
slab Stenotrophomonas lactitubi
Pathway
slab02010
ABC transporters
slab03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
slab00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
AB9L18_10275
03070 Bacterial secretion system
AB9L18_10275
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
slab02000
]
AB9L18_10275
02044 Secretion system [BR:
slab02044
]
AB9L18_10275
Transporters [BR:
slab02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
AB9L18_10275
Secretion system [BR:
slab02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
AB9L18_10275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
Peptidase_C39
SMC_N
ABC_ATPase
AAA_16
AAA_22
AAA_29
AAA_25
SbcC_Walker_B
DUF87
AAA_30
AAA_18
HUTI_composite_bact
NB-ARC
AAA_21
Zeta_toxin
PRK
Motif
Other DBs
NCBI-ProteinID:
XGY84119
LinkDB
All DBs
Position
2271103..2273265
Genome browser
AA seq
720 aa
AA seq
DB search
MPQGDAAPSVPGEVHVQGQQDLALRGLVLLAQFHGIAADASQLAHDAGLGNTPTDETTLV
LAARKLGFKARMVSTPPARLALANLPALALGEDGDAFIIARINGDQVLIHDLAQKRPQSI
DMATLQQRYRGRLLQVASRASVLGELARFDFSWFIPAVVKYRKMLLEVFAVSFFIQLFAL
VTPLFYQVVMDKVLVHRGLTTLDVIAIGLVSIAVFDIVLGGLRTYVFAHTTSKIDVELGA
RLFRHVLALPLAYFESRRVGDTIARVRELENIRNFLTGQALTSVLDLLFTVVFLAVMFHY
SGWLTLIVVISLPLYALISAGITPVLRKRLDEKFARGADNQSFLVETISGIGTVKANAVD
PRVTRTWDNQLAGYVNAGFGVTKIATVGQQSVQLVQKLVSVALLFWGAKLVIDGKLSLGQ
LIAFNMLSGQVAAPIIRLAQLWQDFQQVGISVQRLGDILNTRTELPGSRMALPPIRGDVT
FEQVGFRYRPDTPEILAGIDLHIPAGQVIGIVGRSGSGKSTLTKLVQRLYTPERGRVLVD
GHDLALADPAWLRRQLGVVLQENFLFNRSVRENIALSDPGMPLERVIKAATLAGAHEFIS
ALPEGYDTKVGEQGAGLSGGQRQRVAIARALITDPRILILDEATSALDYESEHAVMSNMR
EICRGRTVIIIAHRLSTVRRANRIVVVDRGRIVESGTHDELLTQSGGHYAQLHRLQQGAA
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgccacagggagacgcggcaccttcggtgccgggggaagtgcatgtgcagggtcagcag
gatcttgcgctgcgcggtttggtactgcttgctcaattccacggtattgcggctgacgca
agtcagctggcgcacgacgctgggctgggcaatacccccacggacgagacaacattggta
ttggcggcccgcaagctgggcttcaaggcgcggatggtgtcgacgccacctgcgcgcctc
gcgctggccaacctgcctgcactggcgctcggtgaggatggtgatgcgttcatcatcgcc
cgcatcaatggggatcaggtgctgatccacgacctggcccagaagcgcccgcagagtatc
gacatggcgacgctccagcaacgctatcgtgggcgattgctgcaggtggcgtcgcgggct
tcggttctcggcgaactggcccggtttgatttcagctggttcatcccagcggttgtcaag
tatcggaagatgctgctggaggtcttcgcggtttcgttcttcatccagttgttcgcactg
gtcacacccctgttctatcaggtggtgatggacaaggtgctggtgcatcgaggcctgact
acactggatgtgattgccatcggcctggtgtccatcgccgtcttcgacatcgtgctcggt
ggactgcgtacctacgtattcgcccacaccaccagcaagatcgacgtagagctcggcgcc
cgcctcttccggcatgtgctggcattgccgctggcgtatttcgaatcccgccgcgtgggc
gacaccatcgcacgcgtgcgcgagctggaaaacatccggaacttcctgaccggacaggca
ttgacctcggtactggacctgcttttcaccgtggtcttcctggcagtgatgttccactac
agtggctggctgactctgatcgtcgtgatctcgttaccgctgtatgcgctcatttcggcg
ggcatcacaccggtactgcgcaaacggctggatgagaagttcgcacgaggcgctgacaac
cagtccttcctggtcgaaacgatcagcggtatcggcacagtgaaggccaatgcagtcgat
ccacgcgtcacgcgcacttgggacaaccagctcgccgggtacgtgaatgccggctttgga
gtcaccaagatcgccaccgtcggccagcagagcgtgcagttggtgcagaagctggtcagc
gtggccctcctgttctggggcgcgaagctggtgatcgatggcaagctgtcactggggcaa
ctgatcgccttcaatatgctgtccgggcaggtggccgccccaatcatccgccttgcgcag
ctgtggcaggacttccagcaggtgggcatctcggtccagcgactgggtgacatcctcaat
acccgcaccgagctcccaggcagccggatggcattgcctcccatccgtggtgatgtcact
ttcgagcaggttggattccgctaccgcccagatacccccgagatccttgcaggcatcgac
ctgcatattcccgccgggcaggtgatcggcatcgttgggcgctcaggatccggcaagagt
acgttgaccaagctggtccagcgcctgtacacgcctgagcgagggcgggtcctggtggac
gggcacgatctggccctggccgatccagcctggttgcggaggcagctgggcgtcgtgctg
caggagaacttcctgttcaaccgcagcgtgcgcgagaacatcgcactgagcgatccaggc
atgccgctcgagcgagtgatcaaggcggcaaccctggccggcgcccacgagttcatttcg
gcgctgcctgaagggtacgacaccaaagtaggtgagcaaggcgcaggcctttcaggcggc
cagcgacagcgcgtggcgattgcccgtgcactgatcaccgacccacgcattctgatcctg
gacgaggccaccagtgcactggattacgagtcggagcacgcggtgatgtccaacatgcgc
gagatctgcaggggtcgtaccgtcatcatcatcgcgcaccgcctgtccactgtgcgcagg
gccaaccggatcgtggtcgtggatcgcggccgcatcgtcgagagcggaacgcacgatgag
ctgctgacgcagtcaggcgggcactacgctcagctgcatcgcctgcaacagggtgcggca
tga
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