Stenotrophomonas lactitubi: AB9L18_11480
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Entry
AB9L18_11480 CDS
T10939
Name
(GenBank) CshA/CshB family fibrillar adhesin-related protein
Organism
slab Stenotrophomonas lactitubi
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLIPPER
CshA_NR2
GEVED
DUF7927
OmpA
CLIPPER_2
DUF7926
Motif
Other DBs
NCBI-ProteinID:
XGY84351
LinkDB
All DBs
Position
complement(2557741..2563794)
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AA seq
2017 aa
AA seq
DB search
MLPSLAWAAAYATGGSSPYRNTVLWLTWGGGTDLGTHGVTLNNGDTSSISMPIASGIDLN
VTCSLANISGGGLLQSYRPGNFSGDSLDDLYNVGGTGGANQLIAGISRSSGTSSFEINCV
STLGGTPYRLRGVVMADAESINNSGEFVEATARGTWNVVEVRKNVGAGPYNVTKSMIGAN
SVVRFGPGNDNNTAAVTFLNFDNAAHAPGSFAVNMGFSMRGSGTTAIAIGLLVPYADFGD
APQSYGDAMHVVDDLQFRPDGLPVNATPTNINTAGYTPGGLAPPLTDFLGTVGPDTEQRS
SYSVDAKGDDNFPAGNPNEENAWPTTYALTVMQAGTPINQSVACVGTGSVAGWIDFNRNG
TFDTGERSNIATCSGGGANLSWTVPTQVSAGTSYVRLRYATNAAQIQQPTGVADDGEVED
HRITITAPALKVVKGNNATGGIWNYGQAGTQYTLTISNTTNVPTGNPPNVPAGVITVRDQ
LPAGIVPNWTGTLTSGSWSCTASGQAVTCTSSQVLSAAGTPGDSSSFTLPVIVSASASGL
LRNHASVGGGYDPFNGGNPPAPGEACTDANHCTRSDVTVPVTRVSYAKRSNTTGPVAVGA
TVSYTVDVTIADGNSRDVLTLTDTLGTGLDFGSVTNAGAFTCNAANPLVCTLPAGTVPGT
YSLTYAATVNAQASGQVVNTVVGTGTDTPTCSSNCTTTTPVAAPRISVSKASATAGPVAV
GDSVAYTVSVVVADARTTAVTTLTDTLGTGLDFGSMTNAGGFTCVPGNPLVCTLPAGTVP
GTYAFSYTGIVNAQAVGQVRNAVVPSGPDNPTCVGACDTTTPLASPQVSYAKQASTGGPV
RVGDSIGYTLSVTVARSRTTDVVTLTDTLGSGLDFSSVTSAGIFTCNAANPLVCTLPAGT
VPGTYSLSYTATVNAQASGTVRNAVLGTGPDTPSCTTNCDTTTPVATPGVSYAKSVNSAG
PVSVGDSLTYTLTTVVTNSRTTDVVTLTDTLGTGLDLGSVTSAGAYTCNAANPLVCTLPA
GTAPGSYSLSYTAVVNTQATGQVTNAVLGSGGDNPSCTVNCDTTTPVAGSQIDYRKTSAA
AGPVKVGDSIAYTLTTVVSRSRTTTVFSLTDNMGQGLDFGSVTASTGFTCNAANPLVCTL
PAATAPGTYTVNYTATVNAQAKGSVSNAVLGSGTGTNTCTTDCTTTTPVLAATVTYRKSS
STASPVNMGDAVDYSVEVVVANSQTSDVLTLTDTLGAGLDLQSVTQPGAFTCNASNPLVC
TLPAGTAPGTYTLGYRAQVNAQASGSVRNAVLGSGGDTPTCIGTCSTEHVLAEPRVVLEK
LSGPASGSEVRPGDRLRYTLRATVERASLRQPLQLVDTPDAGLSVDTLPAGCAQQGTDIV
CTLPTGTPLGQHEFVYQAIVNQEARTEVLNRLRGQYPDGSPPPECTTCETRHKVISDFAL
RITKTANPRLVKVGDLVRYQLVVENVGSSHWRDGVVVDTPPPGFSYVDGSMRVADDDGAF
SLGGSQTPLRIGAVDIAVGRSATITYLLRVGAGVRAGNHINQAVATADDGTPLSNVATAE
VRMDADPLLEDSLVFGSVFDDRDGDGWQDSAELTGVRVQGGFAPDAYVPGSTTLDRGDGP
LPLADASAPLLHGVQVGVVHGLASTSDTVESHQVVIRQRLRELSFTDDFVLESAQGHRLQ
LDAKGVTTVQRSGEAAKGLTAAEPVVHREIARVAEGYEVAYVIGNHGIQEQGIPGVRLAT
VEGLLIETDPFGRYHLADVHGGDARLGRNFIVKLDPATVPGGSELTTENPLLRRVTQGVP
TRFSFGVRLPPSPQAAAERAELALGEVLFAPGSSELRASYRPVLAKMAEVVDRYQGGDVV
IAANGESQALAFARAVAVRDALQAEVAEGSRAGLSVQLRTDVRDPHSLVAGVDAGGALLG
NVLFDTDKAVIREEFKPLLAAIAARLEQMGGGQVSLVGHTDVRGSHVYNQALGLRRANAV
FEALRVQLSPAVQQRLRVRNEETAATRAAARQQEARR
NT seq
6054 nt
NT seq
+upstream
nt +downstream
nt
atgctgccatcgctggcctgggctgcagcctacgcgaccggcggcagcagcccgtatcgc
aacaccgtgctgtggctgacctggggtggcggcaccgacctgggcacgcacggggtgacg
ctgaacaacggggacacgtcgtcgatttccatgccgatcgcctccggcatcgacctcaac
gtcacctgcagcctggccaacatcagcggtggtggcctcctgcagagctatcgtccaggc
aatttcagcggtgacagtctggatgacctgtacaacgtcggtggtaccggcggcgccaat
cagctgatcgcggggatatcgcgcagcagcggtacgtcgtctttcgagatcaactgcgtc
tcgacgctgggtggcacgccctaccgcctgcgcggcgtggtgatggccgatgccgagtcg
atcaacaacagcggcgagttcgtcgaggccaccgcgcgcggtacctggaacgtggtcgaa
gtgcgcaagaacgtcggtgctggcccatacaacgtcaccaagtcgatgatcggtgcgaac
agcgtggtccgctttggaccaggcaacgacaacaacaccgctgcggtcaccttcctcaat
ttcgacaatgccgcgcatgcgccgggcagctttgcggtgaacatgggcttttcgatgcgc
ggcagtggcaccaccgccatcgccatcggcctgctcgtgccgtacgccgacttcggcgac
gcgccgcagagctatggcgatgccatgcacgtggtggacgacctgcagttccggccagat
ggcctgccggtcaacgccacgcccaccaacatcaataccgccggctatacaccgggtggt
ctggcaccgccgctgaccgacttccttggtaccgttgggcccgataccgaacagcgcagc
agctacagcgtcgatgcgaagggcgacgacaacttccccgcaggcaaccccaacgaagag
aacgcctggccgacgacgtacgcgctgacggtgatgcaggccgggaccccaatcaatcag
tcggtggcgtgtgtgggcaccggcagcgtggccggctggatcgacttcaaccgcaacggc
acattcgacacgggcgagcgcagcaacatcgccacatgcagtggcggcggcgccaatctg
agctggaccgtgcccacgcaggtaagtgcgggtaccagttacgtgcgcctgcgctatgcg
accaatgcggcgcagatccagcaaccgaccggcgtggccgatgacggtgaagtggaagac
caccggatcaccatcaccgcacccgcgctgaaggtggtgaagggcaacaatgccaccggc
ggcatctggaactacggccaggctggcacccagtacacgctgacgatcagcaacaccacc
aatgtgccgaccggcaatccgccgaacgtaccggcaggtgtgatcaccgtgcgtgaccag
ctgccggccggcattgtgccgaactggaccggcaccctgaccagcggcagctggagctgt
actgcgagcggccaggcggtgacctgcaccagcagccaggtgttgtcggcagccggcacc
cctggtgacagcagcagcttcaccctgcctgtgatcgtgtccgcatcggcaagcggcctg
ttgcgcaaccacgccagcgtcggtggtggctacgatccgttcaacggtggcaatccgccc
gcaccgggcgaggcctgcaccgacgccaaccactgcacccgcagcgatgtgaccgttccg
gtcacccgggtgagctatgcaaagcgctccaacaccaccggtccggtggcggtgggggcg
acggtgagctacaccgtcgatgtcaccattgccgacggcaacagccgcgacgtgctgacc
ctgaccgataccctcggcaccggcctggacttcggcagcgtgaccaatgccggcgccttt
acctgcaatgcagccaatccgctggtgtgcacgctgccagcgggcaccgtgccgggcacc
tacagcctgacctatgcggccaccgtcaacgcgcaggccagtggccaggtggtcaatacg
gtggtgggcaccggtaccgatactcccacctgcagcagcaactgcaccaccaccacgccg
gtggcggcgccgcgcatctcggtgtccaaggccagcgctacggccggcccggtcgcggtg
ggcgacagcgttgcctacacagtgagcgtggtcgttgccgatgcgcgcaccaccgcggtg
accacgctgaccgacaccctgggcactggcctggacttcggcagcatgaccaatgccggc
ggctttacctgtgtgcccggcaatccgctggtgtgcacgctgccagccggcaccgtgccg
ggaacctacgcgttctcgtataccggcatcgtcaatgcacaggctgttggccaggtgcgc
aatgccgttgtgccgagcggtcctgacaatccgacgtgtgtcggcgcctgtgataccaca
acgccactggccagcccgcaggtgagctacgccaagcaggcctccaccggtggacctgtg
cgggtgggcgacagcatcggctatacgctcagcgtgaccgttgcacgttcgcgcaccacc
gatgtggtcaccctcaccgatacgctgggcagcggcctcgatttcagcagcgtgaccagc
gcgggcatctttacctgcaatgcggccaacccgctggtgtgcacgctgcccgccggcacg
gttccgggtacctacagcctgagttacaccgccacggtcaacgcgcaggccagcggcacg
gtacgcaatgccgtgctcggcaccggccccgacacgccttcgtgcacgaccaactgcgat
accaccacgccggtggcgacgccgggcgtgagctatgccaagtcggtgaacagtgccggc
cccgtgtcggtgggtgacagcctgacctacaccttgaccacggtggtaaccaactcgcgc
accaccgacgtggtgacgctgaccgacacgctgggcaccggtctggatctgggcagcgtg
accagtgccggcgcctacacctgcaatgcggccaacccgttggtgtgcacattgccggcc
ggtaccgcaccgggcagctacagcctgtcgtacaccgccgtggtcaacacccaggccacc
ggccaggtgaccaatgcggtgctcggcagcggcggtgacaacccgagctgcaccgtcaac
tgcgataccactacgccggtggcaggcagccagatcgattaccgcaagacctcggccgcc
gccggcccggtcaaggtgggtgacagcatcgcctacaccctgaccaccgtggtcagccgc
tcgcgcaccaccactgtgttcagcctgaccgacaacatggggcagggcctggacttcggt
tcagtcaccgccagcaccggcttcacctgcaatgcggccaatccgctggtgtgtacgttg
ccggccgccaccgcaccgggcacctacacggtcaactacaccgcaacggtgaatgcacag
gccaagggcagcgtcagcaatgccgtgcttggcagcggcaccggtaccaatacctgcacc
accgactgcaccaccaccacgccggtgctggcggcgacggtcacctaccgcaagtcctcc
agcacggcatcgccggtcaacatgggggatgcagtggactacagcgttgaggtggtggtc
gccaattcgcagaccagcgatgtgctcaccctcaccgatacgctgggggcaggcctggac
ctgcagtcggtgacccagccgggcgccttcacctgcaatgccagcaatccgctggtatgc
acgctgcctgcgggaaccgcacccggcacctacacgctgggctaccgcgcgcaggtcaat
gcgcaggccagtggcagcgtccgcaacgcggtgctgggcagtggcggcgacaccccgacc
tgcatcggcacctgcagtaccgagcacgtgctggccgagccgcgcgtggtgctggaaaag
ctgtccggccccgccagtggcagtgaagtgcgcccgggtgaccggctgcgctataccctg
cgggccaccgtcgagcgtgcttcgctgcggcagccgttgcaactggtggatacgcccgac
gcaggcctgagcgtggatacgctgccggccggctgcgcgcagcaggggaccgacatcgtc
tgcacgctgccgaccggtaccccactgggacagcatgaattcgtctaccaggccatcgtc
aaccaggaggcacgcaccgaggtgctgaaccgactgcgtggccagtacccggatggttcg
ccgccgccggagtgcaccacctgcgaaacgcggcacaaagtgatttcggacttcgcgctg
cgcatcaccaagaccgccaacccgcggctggtgaaagtcggcgacctggtgcgctaccag
ctggtggtcgagaacgtcggcagcagccattggcgcgacggcgtggtggtcgatacaccg
ccgccgggcttcagctacgtggatggctcgatgcgcgtggccgacgacgacggcgcgttc
tcgctgggcggcagccagaccccgctgcgcatcggcgcggtcgacattgccgtgggccgc
agtgccaccatcacctacctgctgcgtgtcggtgcgggcgtgcgtgccggcaaccacatc
aaccaagccgtggccactgccgatgacggcactccgctgtcgaacgtggcgaccgctgaa
gtgcgcatggacgccgatccgctgctggaagacagcctggtgttcggcagcgtgttcgat
gatcgtgatggcgacggctggcaggacagcgcggaactgaccggtgtacgcgtgcagggc
ggattcgcgcccgacgcttacgtgccgggttcgacaacgctggatcgtggcgatggcccg
ctgccgttggccgatgccagcgcgccgctgctgcatggcgtgcaggtgggcgtggtgcat
gggcttgcgtctacctcggacacggtcgagagccaccaggtggtgatccgccagcgtctg
cgcgagctgtccttcaccgatgatttcgtgctggaaagcgcacagggtcatcgcctgcag
ctggatgcgaagggtgtcacaaccgtgcagcgcagtggcgaggcggccaagggcctgacc
gcggccgagccggtcgtgcatcgcgagatcgcgcgggtggccgagggctatgaggttgcc
tacgtgatcggcaaccacggcatccaggagcagggcattcccggcgtgcgcctggccacg
gtggagggcctgctgatcgagaccgatccgttcggtcgttaccacctggccgatgtgcac
ggtggcgatgcgcggttgggccgcaacttcatcgtcaagctggatccggcaacggtaccg
ggtggttccgagctgaccaccgagaatccgttgctgcgtcgggtcacccagggcgtgccg
acccgcttcagcttcggtgtgcgcctgccgccgtcgccgcaggcggctgccgagcgcgcc
gagctggccttgggcgaggtgttgttcgccccgggcagcagcgaactgcgcgccagctat
cgcccggtgttggcgaagatggccgaggtggtcgatcgctaccagggcggtgacgtggtg
attgctgccaacggcgaaagccaggcattggccttcgcccgtgcggtagccgtgcgtgat
gcgctgcaggccgaggtggccgaagggtcgcgtgctggcctgagcgtgcagctgcgtacc
gatgtgcgcgatccgcactcgctggtcgctggtgtcgatgccggtggtgcgttgctcggc
aacgtgctgttcgacaccgacaaggcggtgatccgcgaggagttcaagccgctgctggct
gcgatcgccgcgcgcctggagcagatgggaggtggccaggtcagcctggtcggccatacc
gatgtacgtggcagccatgtctacaaccaggcgttgggcctgcgccgcgccaacgccgtg
ttcgaagcgctgcgcgtccagctcagccccgccgtgcagcaacgtctgcgtgtgcgcaac
gaggagaccgccgccacccgcgcggcggcccgccaacaggaggcccgccgatga
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