Stenotrophomonas lactitubi: AB9L18_12370
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Entry
AB9L18_12370 CDS
T10939
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
slab Stenotrophomonas lactitubi
Brite
KEGG Orthology (KO) [BR:
slab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
slab03400
]
AB9L18_12370
Enzymes [BR:
slab01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
AB9L18_12370
DNA repair and recombination proteins [BR:
slab03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
AB9L18_12370
Prokaryotic type
AB9L18_12370
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
XGY84518
LinkDB
All DBs
Position
complement(2756069..2757484)
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AA seq
471 aa
AA seq
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MSVALVWFRRDLRLQDNPALQAALEAGHDVVPVYIHAPHEEGDWAPGAASNAWRHRSLAA
LDADLRARGSSLVLRAGDSLPNLQALIDQTGAEALYWNRKYEPATQSRDAAIKRTLREQG
IDAQSCNGSLLFEPWDIATQQGQPYKVFTPYWRNVLSHWRLPALQEAPRTLAAHTVEGLA
LDALQLAPSLQWDSGFWEHWQPGEAGALEALSVFEEGALRGYREQRDLPDRVGTSRLSPH
LHFGEIAPWRIAHALEGLRSAGTDADIDGYLRQLGWRDFAYHLLHHFPKTPTDNLNPRFD
RFPWANPSAAQLQDWQRGNTGVPIVDAGLRELWHTGYMHNRVRMIVASYLCKHLRAHWLH
GAQWFWDTLVDADLANNTMGWQWVAGTGADAAPYFRVFNPVTQAEKFDPQASYISRWVPE
LAALPVKARFAPWQHPQLLAERAPGYPRTPLVDLAAGRDAALAAYRQSAAG
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
gtgtcggtagcgttggtatggttccgtcgggacctgcggttgcaggacaatccggcgctg
caggcggcgctggaagcgggccacgatgtggtgccggtctacatccacgccccgcacgaa
gaaggcgactgggcgccgggcgccgcgtcgaacgcgtggcgccaccgctcgctggcggcg
ctggatgccgacctgcgtgcacgcggctcctcgctggtgctgcgtgccggcgacagcctg
ccgaacctgcaggcgctgattgatcagaccggcgccgaggcgctgtactggaaccgcaag
tacgaaccggcgacacaatcgcgcgatgctgccatcaaacgcacgctgcgcgagcagggc
atcgacgcgcagagctgcaacggcagcctgttgttcgagccctgggacatcgccacccag
caagggcagccctacaaggtattcactccgtactggcgcaacgtgctcagccattggcga
ttgccggccctgcaggaggcgccgcgcacgttggccgcacacacggttgaaggcctggcg
ctggacgcgctgcagctggcgccgtcgttgcagtgggactccggcttctgggagcactgg
cagccgggtgaggccggtgcgctcgaggcgctgtccgtgttcgaggagggtgcgctgcgc
ggctatcgcgagcagcgcgatctgccggaccgggtaggtacctcgcggctgtcgccgcac
ctgcatttcggcgaaattgccccgtggcgcattgcccacgcgctggaaggtctgcgcagc
gccgggaccgatgccgacatcgacggctacctgcgccagctcggctggcgtgacttcgcc
taccacctgctgcaccacttcccgaaaacgccaaccgacaacctcaatccacgcttcgat
cgctttccgtgggccaaccccagtgctgcccagctgcaggactggcagcgcggcaacacc
ggcgtgcccatcgtcgatgctggcctgcgtgaactctggcataccggttacatgcacaac
cgggtgcggatgatcgtcgccagctacctgtgcaagcacctgcgtgcgcattggctgcat
ggcgcccaatggttctgggacacgctggtggatgcggacctggccaacaatacgatgggg
tggcagtgggtggccggtaccggtgccgacgcggctccctatttccgggtattcaatccc
gttacccaggccgagaagttcgatccacaagcgagttacatcagtcgttgggtgccggag
ctggcggcgctgccggtgaaggcgcgcttcgctccctggcagcacccgcaactgttggcc
gaacgcgcgcccgggtatccgcgtacgccgctggtggacctggcggcaggccgtgatgcg
gcgctggccgcctaccgtcagtcggcggcggggtaa
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