Stenotrophomonas lactitubi: AB9L18_13315
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Entry
AB9L18_13315 CDS
T10939
Name
(GenBank) pilus assembly protein
KO
K02674
type IV pilus assembly protein PilY1
Organism
slab Stenotrophomonas lactitubi
Brite
KEGG Orthology (KO) [BR:
slab00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
slab02044
]
AB9L18_13315
02035 Bacterial motility proteins [BR:
slab02035
]
AB9L18_13315
Secretion system [BR:
slab02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
AB9L18_13315
Bacterial motility proteins [BR:
slab02035
]
Pilus system
Pilus assembly proteins
AB9L18_13315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T4P_PilY1
DUF5977
Motif
Other DBs
NCBI-ProteinID:
XGY84688
LinkDB
All DBs
Position
complement(2930772..2934635)
Genome browser
AA seq
1287 aa
AA seq
DB search
MVTRKFGITAGVGALLLASGVYFIYNLFAAQGQGELAQAPMNSVSSAPPAFIMAVDDSNS
MTFERIFVGGDGRMQWNGSSFFQSAGVFYDIGAGCTNNSIDCYLYLFPHNGYNSSYSPGR
AIPPFDVFGFARSPAYNAGYFDPNVKYDPWRLAEADASNSVLMKPADIGLTRADPRTGSD
FSTAYAVTYNMEATRANTGESFRVLAGMTIPKGTLYYANGQICYSTYTDRWGNVYSNNDG
LKDSNGKWVTLADDWVSPGNCQLPMRYYPATYYLPEATPAPAGYKTDAASRPLIKNACGP
GCNMYRYTIASGNYTSGYSDAIQNFANWFQYHRNRILSMVGSSSHAMGQIENMRVGYFTI
NNRTDVTMYDVAKQRASLYQQIYSLKPNGGTPNREAVDFLGKQFRRTDSGAPVALACQRN
GGMLFTDGYTNTSSKVPNGTDYGNADSSGTTHFTGAPFADGYSNTIADIAAAYYDSSNLV
PLRGGTAFPAGQVPVSKQCESLSKSSADWKRLDCQTNLHMNFYAVTLGAQGRIFEVNQAA
TKDPYTTTPNWNANGNPVDSDDGRVIDELWHATVNTRGEFINAKTPAEVTAAMRRVLSAV
ASGSSPSGSIALTGARIGAGSLTVTPQYEVANEGTDWFSRLRANQVTVDPKTRAAVYTPI
WEASTAFPAPSARKIYYANGSSVSEFNDGSVTLEALCGTPTNLYPTMSRCDAAALTALGA
SASSAVAYLRGDTSGEVRNGGKLRDRTAILGDIINSSPLISSPIDDYGYRALGGTLGTSY
EAYMKAKKDKRYMVYVGANDGMLHAFDGGMDAAGKVSGNGGSETFAYVPGTSIGHMGNLL
KPYNPLNAKDQVPHRYFVDGPVTVGDTFYGNSWHTTLVGTTGAGGRGVFALDVTTPDSFG
TGSRLWEINDITGATQTIRENIGHVLGKPVIVPVKSGTTVSWKAIFGNGYNSKSGKAVLF
VVDLDSGTGDPTVRMIEAAETGSNVPAGVNGLGNIVVLDRKNNVDPSIAVRDGYADTVYG
ADAKGAVWRFDLLSTSNSISTPVFTSLASVENSQTYRQPITGGLAAATGEGGGVQLVFGT
GSFSFLNDAKDVTLQSLYSITDRSGATITTVTRSNLLPYAVSTGTDGVSRTMTVGTRPSN
MLGWSIDLPTGERFVGYPEIVSGVLFMPTYAAKVTATDCSTVGANWLFGLDARSGAPALS
TVRTGSPSGTGYGKGTAAIALDTGGTAPIKDVAVSVVPRLEAPANPGGGAAPPAVPGSGC
WMVVNVAGAPPMYLPYPCGRQSWRQIQ
NT seq
3864 nt
NT seq
+upstream
nt +downstream
nt
atggtcacgcgcaaatttggcattaccgcaggcgtgggcgcattgctgctcgcctcaggt
gtgtacttcatctacaacctgttcgccgcgcaggggcagggcgagctcgcgcaggctccg
atgaactcggtcagctcggcgccgccggcattcatcatggctgtcgatgattccaactcg
atgaccttcgagcgcatcttcgtcggtggcgacggccgcatgcaatggaatggcagcagc
ttcttccagtcggccggtgtgttctatgacattggcgccggttgcaccaacaactccatc
gactgctatctctacctgttcccgcataacggttacaacagcagttacagcccggggcgt
gcgattccgccgttcgatgtgttcggttttgcgcgttcgcctgcctacaacgcgggatat
ttcgatccgaacgtgaagtatgacccctggcggttggcggaggccgatgcatccaacagc
gtgctgatgaagcctgcagatatcggcctgacacgcgcggatccacgtaccgggtctgac
ttctccacggcctacgcggtgacatacaacatggaagccacccgggccaatacgggtgag
agtttccgtgtgcttgcgggtatgaccattcccaaagggacgctttattacgcaaacggt
cagatctgctattcgacctataccgatcgctggggcaacgtctattccaacaacgacggt
ttgaaggacagcaacggcaagtgggtcacactggcagacgactgggtgtcgcccgggaac
tgccagcttcccatgcgctactaccccgccacctactatcttccggaagccaccccggca
ccggcgggctacaagaccgacgccgcgagccgtccgctgatcaagaacgcctgcggccct
ggctgcaacatgtaccggtacaccattgcttcgggcaactacaccagcggctacagtgat
gcgatccagaacttcgcgaactggttccaataccaccgcaaccgcatcctctccatggtc
ggttcgtcctcgcatgcgatggggcagatcgagaacatgcgcgtgggctacttcacgatc
aacaatcgcaccgacgtgacgatgtatgacgtggccaagcagcgagcgtccctgtatcaa
cagatctattcgctcaagcccaacggtggcacgccgaatcgtgaggcagtggacttcctt
ggcaagcagttccggcgcaccgattccggcgcgccggtcgcactggcctgtcagcgcaat
ggtggcatgctgttcaccgacggctataccaataccagcagcaaggtgccgaatggcacc
gactacggcaacgccgattccagtggcaccacgcacttcactggagcaccgttcgccgac
ggctacagcaataccatcgccgacattgctgctgcgtactacgacagcagcaacctggtg
ccgctgcgcggtggtacggccttcccggcagggcaggttcccgtcagcaagcagtgtgag
tcgctgagcaagagttcggccgattggaagcggctggactgccagaccaatctgcatatg
aatttctacgctgtgacgcttggcgcgcagggcaggattttcgaggtcaaccaggccgcg
acgaaagatccgtacacgacgacaccgaattggaacgccaatggcaacccggtggattcc
gacgatggtcgcgtgatcgatgagctctggcatgccactgtcaacacccgtggtgaattc
atcaacgccaagacaccggcggaagtaaccgccgcgatgcgtcgcgtgctttctgcggtg
gcatccggttcgtccccctcgggcagcatcgcgctgacgggggcgcgtatcggcgccggt
tcgttgaccgtgacgccgcagtatgaagtcgccaatgaaggcactgactggttcagccgc
ctcagggcgaaccaggtcacggtcgatcccaagacccgcgctgcggtatacacccccata
tgggaggccagtactgccttcccggcaccgtcggcacgcaagatctactatgccaacggc
agttcggtcagcgagttcaacgacggctcggtgacccttgaggcgctttgcggcacgccc
acgaacctctatccgacgatgagccgttgcgatgcggcagcactgaccgctctcggcgcc
tccgcttcgtcggcagtggcctacctgcgcggagacacctcgggtgaagtccgcaatggt
ggcaagctgcgcgaccgtaccgcgattctgggtgacatcatcaactcgtcgccgctgatc
agctcgcccatcgatgattacggttatcgtgcgttgggcggtacgctgggcacgtcctac
gaggcctacatgaaggccaagaaggacaagcgctacatggtctacgtgggcgccaacgat
ggcatgctgcacgctttcgacggcggcatggatgcggccggcaaggtgtccggcaacggt
ggcagcgagacgttcgcctatgtcccagggacttcgatcggacatatgggcaacctcctc
aagccttacaacccgctcaatgccaaggaccaggtgccgcatcgatacttcgtcgacggt
cctgtcaccgttggcgacacgttctatggcaacagttggcacaccacgctggtgggcacc
accggtgcgggtggtcgcggcgtgttcgcgctggacgtcactaccccggacagcttcggg
acaggtagtcgcctgtgggagatcaatgacatcaccggtgccacccagaccatccgcgag
aacattggccacgtgctcggcaagccggtgatcgtgccggtcaagtcgggtacgaccgtg
agctggaaggcgatcttcggcaacggctacaacagcaagagtggcaaggccgtgctgttc
gtggtcgacctcgactcgggtaccggtgacccgaccgtgcgcatgatcgaggcggcagaa
accggcagcaatgttccagccggtgtgaacggtctcggcaacatcgtggtgcttgaccgc
aagaacaacgtcgatccttcaatcgcggtacgcgatggctatgcagacaccgtgtacggt
gccgacgccaagggggctgtgtggcgtttcgacctgctgtccacctccaactcgatttcc
acaccagtgttcacctcccttgcttcagtggagaattcccagacctaccggcagccgatc
accggcggtctggcggctgccacgggtgaaggtggtggcgtgcaactggtgttcggtacc
ggcagcttctcgttcctgaacgatgccaaggacgtcacgttgcagtcgctgtactcaatc
acggaccgctctggagcaacgatcactacggtgacgcgcagcaatctgctgccctacgcg
gtgtctaccggcaccgatggcgtatcgcggaccatgacggtgggcaccaggccttccaac
atgctggggtggtccatcgatctgcccaccggcgagcgtttcgtcggctatcctgaaatc
gtgtccggcgtattgttcatgccgacctatgcggcgaaggtgaccgcgaccgactgcagt
acggtcggtgcgaactggttgttcggccttgatgcgcgctcgggtgcgcctgcgttgtcg
acagtgcgtaccggttcgcctagcgggacaggctatggcaaggggaccgctgccatcgcg
ctggataccggcggcaccgcgccgatcaaggatgtggctgtttcggtggtgccgcgcctc
gaagcacccgccaatccgggcggcggcgccgcgcccccggctgttcccggtagcggttgc
tggatggtggtcaacgtggccggcgccccgccgatgtacctgccttatccctgtggtcgc
cagtcctggcgccagatccagtaa
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