KEGG   Stenotrophomonas lactitubi: AB9L18_15965
Entry
AB9L18_15965      CDS       T10939                                 
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
slab  Stenotrophomonas lactitubi
Pathway
slab03030  DNA replication
slab03430  Mismatch repair
slab03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:slab00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    AB9L18_15965 (dnaQ)
   03430 Mismatch repair
    AB9L18_15965 (dnaQ)
   03440 Homologous recombination
    AB9L18_15965 (dnaQ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:slab03032]
    AB9L18_15965 (dnaQ)
   03400 DNA repair and recombination proteins [BR:slab03400]
    AB9L18_15965 (dnaQ)
Enzymes [BR:slab01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     AB9L18_15965 (dnaQ)
DNA replication proteins [BR:slab03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     AB9L18_15965 (dnaQ)
DNA repair and recombination proteins [BR:slab03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     AB9L18_15965 (dnaQ)
SSDB
Motif
Pfam: RNase_T RNase_H_2 DNA_pol_A_exo1
Other DBs
NCBI-ProteinID: XGY85189
LinkDB
Position
complement(3504153..3504881)
AA seq 242 aa
MRQIILDTETTGLEWKKGNRVVEIGCVELFKRRPTGNTYHQYLKPDCEFEQGAQEVTGLT
LEFLADKPEFAQVVEEFLAFIDGAELIIHNAAFDLGFLDNELSLLGEQYGKITDRCTVID
TLALARERFPGQRNSLDALCKRLGVDNSHRALHGGLLDAQILGDVYIALTSGQEEIGFGL
GDDDAGGAAVLQAFDASKLLPRPRVVATPSEQEAHAARLERLRKKAGHALWDGPKVEEAA
SA
NT seq 729 nt   +upstreamnt  +downstreamnt
atgcgtcagatcatccttgataccgaaaccaccggcctggagtggaagaagggcaaccgc
gtcgtcgaaatcggctgcgtcgagttgttcaagcgccgcccgaccggcaacacctatcac
cagtacctgaagcccgactgcgaattcgaacagggcgcgcaggaagtgaccggcctgacc
ctggaattcctggcagacaagccggagtttgcgcaggtcgtggaggagttcctggccttc
atcgatggcgccgagctgatcatccacaacgccgcgttcgatctgggcttcctcgacaac
gagctgtccctgctcggcgagcagtacgggaagatcaccgatcgctgcacggtgatcgat
accctggcgctggcgcgcgagcgtttcccgggtcaacgcaactcgctcgatgcgctgtgc
aagcggctgggcgtggacaactcgcatcgcgccctgcatggcggtctgctggatgcgcag
atcctgggcgatgtgtacatcgcactgacctcgggccaggaggagatcggcttcgggctg
ggcgatgatgatgccggtggcgctgcggtgttgcaggcgttcgatgcgtccaagctgctg
ccgcgcccgcgcgtggtggccacgccgtcggaacaggaagcacatgcggcgcgcctggag
cggctgcgcaagaaggccggccacgcattgtgggacggcccgaaggtggaagaggctgcg
agcgcgtag

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