KEGG   Stenotrophomonas lactitubi: AB9L18_17335
Entry
AB9L18_17335      CDS       T10939                                 
Symbol
ribD
Name
(GenBank) bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
slab  Stenotrophomonas lactitubi
Pathway
slab00740  Riboflavin metabolism
slab01100  Metabolic pathways
slab01110  Biosynthesis of secondary metabolites
slab01240  Biosynthesis of cofactors
slab02024  Quorum sensing
Module
slab_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:slab00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    AB9L18_17335 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    AB9L18_17335 (ribD)
Enzymes [BR:slab01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     AB9L18_17335 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     AB9L18_17335 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam
Other DBs
NCBI-ProteinID: XGY85438
LinkDB
Position
complement(3782445..3783530)
AA seq 361 aa
MSTSFTVLDHLHMATALRLAERGAYTTRPNPMVGCVIAHGERVVGQGWHQRAGGPHAEVF
ALREAGSEARGATAYVTLEPCAHYGRTPPCALALIDAGVSRVVAAMRDPFPKVDGGGFDL
LREAGIEVAEGLMAEQARELNKGFLSRVERNRPWLRVKLAASLDGRTAMADGSSKWITGP
AAREDVQHWRARAGAILTGADTVIADDPMLTVRLADTEVMPPLRVVLDSRLRSLECSSVR
EGGAPTLYLHDAMVSPPDAADAAFASVAVRHGRLDLGAVLALLAERGINEVHTEAGATLA
GALLHGGWVDELLLYQAPTLLGDSGRPLLAGLGIDTMDQQRRLRVVDQRQVGEDLRLLLR
A
NT seq 1086 nt   +upstreamnt  +downstreamnt
atgagcacatcgttcaccgtccttgaccacctgcacatggccaccgcattgcggctcgcc
gagcgtggtgcgtataccacccgtcccaatccgatggtcggctgtgtgatcgcccatggc
gagcgcgtggtcgggcagggctggcaccagcgtgccggcggcccgcatgccgaagtgttc
gcgttgcgcgaggccggcagcgaagcacgtggtgccaccgcctacgtcaccctggaaccg
tgcgcgcattacggccgcacgccgccgtgtgcgttggcgctgatagacgccggcgtgtcg
cgtgttgtggccgcgatgcgcgacccgttcccgaaagtggatggcggtggtttcgatctg
ctgcgcgaagctggcatcgaggtcgccgagggcctgatggccgagcaggcgcgagaactc
aacaagggcttcctgtcgcgcgtggagcgcaatcgtccgtggctgcgggtgaagctcgca
gccagcctggatggccgtaccgcgatggccgacggcagctcgaagtggatcaccgggccc
gccgcgcgcgaggatgtgcagcactggcgcgctcgcgccggcgcgatcctgaccggtgcc
gacaccgtgatcgccgacgacccgatgctgaccgtgcgcttggctgacaccgaggtgatg
ccaccgttgcgcgtggtactggattcgcgtctgcgctcgctggaatgcagcagcgtgcgc
gagggtggagcgccgacgctgtacctgcacgatgcgatggtcagcccgcccgatgcggcc
gacgcggcattcgccagcgtcgctgtccgccacggccgccttgatctgggcgcggtactg
gcactgctcgccgagcgcggcatcaacgaagtgcataccgaagccggcgcgacgctggcc
ggtgcactgctgcacggcggctgggtggacgaactgctgctgtaccaggcaccgaccctg
ctcggcgacagcggccgcccgctgctggctggtcttggcatcgacacgatggaccagcag
cgccgcctgcgcgtggtcgatcagcgccaggtgggtgaggatctgcgtctgctgctgcgc
gcctga

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