Stenotrophomonas lactitubi: AB9L18_17640
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Entry
AB9L18_17640 CDS
T10939
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
slab Stenotrophomonas lactitubi
Pathway
slab00521
Streptomycin biosynthesis
slab00523
Polyketide sugar unit biosynthesis
slab00525
Acarbose and validamycin biosynthesis
slab00541
Biosynthesis of various nucleotide sugars
slab01100
Metabolic pathways
slab01110
Biosynthesis of secondary metabolites
slab01250
Biosynthesis of nucleotide sugars
Module
slab_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
slab00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
AB9L18_17640 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
AB9L18_17640 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
AB9L18_17640 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
AB9L18_17640 (rfbB)
00525 Acarbose and validamycin biosynthesis
AB9L18_17640 (rfbB)
Enzymes [BR:
slab01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
AB9L18_17640 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
adh_short
3Beta_HSD
NAD_binding_4
NAD_binding_10
Motif
Other DBs
NCBI-ProteinID:
XGY85498
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Position
complement(3859688..3860743)
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AA seq
351 aa
AA seq
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MPTWLVTGGAGFIGGNFVLEAAARGVKVVNLDALTYAGNLKTLSSLDGNPNHVFVQGDIG
DSALVARLLAEYQPDAVLNFAAESHVDRSIDGPGAFIQTNVVGTLGLLEAVRDYWKALPA
EQGAAFRFLHVSTDEVYGTLGETGKFSETTPYAPNSPYSASKAASDHLVRAFHHTYGLPV
LTTNCSNNYGPYHFPEKLIPLVIAKALAGEPLPVYGDGKQVRDWLFVSDHCEAIRTVLAK
GQVGETYNVGGNSEKQNIEVVQAICALLDQRRPRADGQPRSSQITYVTDRPGHDRRYAID
ASKLKNDLGWEPAYTFEQGIGFTVDWYLDNQEWVNGVLNGSYRLQRIGTTA
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
gtgcccacatggcttgtcaccggcggcgccggattcattggcggtaacttcgttctcgag
gctgccgcccgcggcgtcaaggtcgtcaatctcgatgcgctgacctacgccggcaacctg
aagaccctgtccagcctggacggcaatcccaaccacgtgttcgtgcagggtgacatcggc
gacagcgcgctggttgcccgcctgctggccgagtaccagccggacgcggtgctgaacttc
gctgctgaaagccacgttgaccgctccatcgatggccccggcgcattcatccagaccaac
gtcgtcggcaccctcggcctgctcgaggcggtacgcgattactggaaggcgttgccggct
gaacagggcgcagccttccgcttcctgcatgtctcgaccgacgaggtgtacggcaccctg
ggcgagaccggaaagttcagcgaaaccaccccgtatgcgccgaactcgccgtactcggca
tccaaggcagcctcggaccacctggtgcgtgcgttccaccacacctacgggttgccggtg
ctgaccaccaactgctccaacaactacggcccctatcacttccccgagaagctgatccca
ctggtgatcgccaaggcgctggccggcgagccgctgccggtgtacggcgacggcaagcag
gtgcgtgattggctgttcgtgtccgaccattgcgaagcgatccgtaccgtgctggccaag
ggccaggtcggcgagacctacaacgtcggcggcaactcggaaaagcagaacatcgaagtg
gtgcaggcaatctgtgcgctgctggaccagcgccgcccgcgtgcggatggccagccgcgc
agcagccagatcacttacgtcaccgaccgcccgggccatgaccgccgctatgcgatcgac
gcctccaagctgaagaacgacctgggctgggaaccggcctacacctttgaacagggaatc
ggcttcaccgttgactggtacctggacaaccaggaatgggtgaacggcgtgctcaacggc
agctatcgcctgcagcgcatcggcaccacggcctga
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