Stenotrophomonas lactitubi: AB9L18_20035
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Entry
AB9L18_20035 CDS
T10939
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
slab Stenotrophomonas lactitubi
Brite
KEGG Orthology (KO) [BR:
slab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
slab03032
]
AB9L18_20035
03400 DNA repair and recombination proteins [BR:
slab03400
]
AB9L18_20035
Enzymes [BR:
slab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
AB9L18_20035
DNA replication proteins [BR:
slab03032
]
Prokaryotic type
DNA Topoisomerases
AB9L18_20035
DNA repair and recombination proteins [BR:
slab03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AB9L18_20035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
XGY85950
LinkDB
All DBs
Position
complement(4373937..4374995)
Genome browser
AA seq
352 aa
AA seq
DB search
MPATPTPERQAARAAGLRYVDDTQPGFSRVRAGKGFSYRDADGHAIRDAATLQRIRSLAV
PPAYTAVWICAHANGHLQATGRDARGRKQYRYHADWAAVRDAGKFDRIIAFGQALPALRR
RLGRDLKRSGFPREKVLAVVVALLADTLVRVGNETYAQENKSYGLTTLRNRHLDLLRGGR
VRMRFRGKSGQLHEVTVGDRRLGALVRSVQQLPGQSLFQYRDDADEVQPVDSGAVNDYLR
EVMGEDFTAKDFRTWGGTMAAVQAFAATELPEPPSQRALAKAQREVVCQVAARLGNTPAV
CRKAYIDPCVFAGWERGELTALAGLRGPRQWEQATLKVLRRARRLAKRGGAS
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgcccgccacccctacacccgaacgccaggccgcgcgcgccgccggcctgcgctacgtc
gatgacacacagcccggtttcagccgcgtccgcgctggcaaaggcttctcctatcgcgat
gccgacggtcatgccatacgcgatgccgccacactgcagcgcatccgctcgctggccgtg
cccccggcctacaccgcggtgtggatctgcgcccatgccaacggccatctgcaggccacc
ggccgcgacgcgcgcgggcgcaagcagtaccgctaccacgccgattgggcggcggtgcgt
gatgccggcaagttcgaccgcatcatcgccttcggccaagcgttgccggcgctgcgacgg
cgtctcggccgcgatctcaagcgcagtggcttcccccgtgagaaggtgctggcggtggtg
gtggcgctgctggcagacacgctggtgcgcgtgggcaacgagacctatgcgcaggagaac
aagtcgtacggcctgacaacgctgcgcaaccgtcacctggacctgctacgggggggccgc
gtgcgcatgcgcttccgcggcaagtccggccagttgcatgaggtgacggtgggcgaccgt
cggctgggcgcgctggtgcgcagcgtgcagcagctgccggggcagtccctgttccagtat
cgcgacgacgcggacgaggtgcagccggtggattcaggcgcggtgaacgactacctgcgc
gaggtgatgggcgaagacttcaccgccaaggatttccgcacctggggcggcacgatggcg
gcagtgcaggccttcgccgccaccgagctgcccgaaccgcccagccagcgcgcgctggcc
aaggcgcagcgggaggtggtctgccaggtggccgcgcggctgggcaatacgccagcggta
tgtcgcaaggcctacattgatccctgcgtgtttgccggctgggaacgcggcgagctgact
gcactggcgggcctgcgcggcccgcggcagtgggagcaggcgacgctgaaagtgctgcgt
cgggcgcggcgcctggccaagcgcggcggcgcgtcgtaa
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