Stenotrophomonas lactitubi: AB9L18_20590
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Entry
AB9L18_20590 CDS
T10939
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
slab Stenotrophomonas lactitubi
Pathway
slab03440
Homologous recombination
Brite
Enzymes [BR:
slab01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
AB9L18_20590 (recB)
DNA repair and recombination proteins [BR:
slab03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AB9L18_20590 (recB)
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GFIT
Other DBs
NCBI-ProteinID:
XGY86057
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Position
4509801..4513475
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AA seq
1224 aa
AA seq
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MSRVAEDPSIDTRLPDPYLALPLHGTRLIEASAGTGKTFTLATLFTRLVVEQGLRIGQIL
AVTFTDAATQELRKRIRERLALAARLVDLPPGEDETPDAVLTRQVLQRHLQDGTESAKAL
KRRLQVAADEIDLAAIFTIHGFCTRVLREHALESGHTFDPPELLASDRELLEELAADLWR
VHANDPATLEPLTWLWSTPDALAADLRALLASPPLHPRPQPLAVDDPRPALGAVAVELAA
AVREHGERFFLDLCEAVDNKWINGVSYKLGWLHPLGRQLLGWAERGDAAELLSSDRLPAL
LPDALVAKTNKKFAERTPSSPLQAPLQRYVALLAQREQWLRASALNFLHALREDATQRLS
ALKRLRRVQTYDDLIDGVARALEGPQRLPLVKQLRAQYRIALVDEFQDTDDRQWGIFHTV
FGASPEVDELELQPALFLIGDPKQAIYGFRGGDIHTYLKAKQVAEQAPALDQNFRSRPAV
LRALQALYDNAGEDAFLERDIQFEPVRPGGVRTDEDYLRDGRAAPALTLRLLRSDGEKAF
GADASRDAATQACVAAIHQILLEARAGTALLRGRALQPGDIAVLVRSHREATLVQRALAA
VGIPAVAAGKQSLFATSEARDLRALLLALLQPADEGRLRTALATVLLGQRASAIASMERE
GDLQRGFQAQLLHWRERWQRGGPFAVVADVCAAQGERLLALIDGERRLTNYLQLGELLQE
ASAQALGMHGLLDWLQGQMANADQDDEQQLLRLESDARRVQIITLHKSKGLEYPLVFLPF
VGIDGGAPNTASHCTVHLQGERQLHWKLDKDDAWEAASSQREREQRAEDARLLYVGLTRA
EHALWIATGDLAGHAKTRLAPLLGDLQVLRAHADVELDDSVLPGRLPQLLAETEGELPAV
RALTRRVPHDWWVYSFTQLAHADAGNSDDIEAAATELPAPAADEPAGAELPLEPALPEAA
AEDMAPPDPRFMGSRFGNVLHDALENVDFGLWTGWQPEQPAPEGQADVLRRSLHDEGYAD
EDLDDGVAVLVPLVGHTLTVPLPEGGALCSVPEHERRAEIEFHFAIEPTAVPVLLQLLHD
HGISSARRGFGLRRRLEGLMTGKIDLTYVRDGRWYVLDYKSNRLPGYSPDLLQIAMRHSE
YDLQALIYTVALHRWLRFRLGAAYDYARDMGGIRYLFCRGLEVAGNGVHVQRFAPELVDA
LDALFAGGEAAQADMAARARGETA
NT seq
3675 nt
NT seq
+upstream
nt +downstream
nt
atgagccgcgttgccgaggacccttccatcgacacacgtttgcccgacccttacctagcg
ttgccgctgcacggcacgcgactgatcgaagccagtgccggcaccggcaagaccttcacc
ctggcgacactgttcacccgtctggtggtcgagcagggcctgcgtatcggccagatcctg
gcggtgacgttcaccgatgcggcgacccaggagctgcgcaagcgcatccgcgaacgtctg
gccctggccgcacgcctggtcgatctaccgcccggcgaagatgaaacgcccgacgcggtg
ctgacccggcaggtgctgcaacgccatctgcaggacggcaccgaaagcgccaaggcgttg
aagcggcgcctgcaggtggctgccgacgaaatcgacctggcggcgatcttcaccatccac
ggcttctgcacccgcgtgctgcgcgaacatgcgctggagagcgggcataccttcgacccg
ccggagctgctggccagcgatcgtgaactgctggaagaactggccgccgatctctggcgc
gtgcatgccaacgacccggccacgctggaaccgttgacctggctgtggtccaccccggat
gcgctggcggctgacctgcgcgcgctgctggcttcgccccccctgcacccgcggccgcag
ccgctggccgtggacgacccgcgcccggccctgggagcggtcgcggtggaactggctgct
gccgtgcgcgagcacggtgagcgcttcttcctggacctgtgcgaagcggtcgacaacaag
tggatcaacggcgtctcctacaagctgggttggctgcacccgctgggtcgccagctgttg
ggttgggccgagcgcggcgacgccgccgaactgctgtccagcgaccgcctgccggcactg
ctgcccgatgcgctggtggccaagaccaacaagaagttcgccgagcgcacgccgtcctcg
ccgctgcaggcaccgctgcagcgctacgtggcactgctggcccagcgcgaacagtggttg
cgggcgagcgcgctgaacttcctgcatgcactgcgcgaggatgccacccagcgcctgtcg
gccctgaagcgcctgcgccgcgtgcagacctacgacgatctgatcgacggtgtggctcgc
gcgctggaaggaccgcagcggctgcccctggtgaagcagctgcgtgcgcagtaccgcatc
gccctggtcgatgaattccaggataccgacgaccgccagtggggcatcttccataccgtg
ttcggcgcctcgccggaggtggacgaactggagctgcagccggcgctgttcctgatcggt
gaccccaagcaggccatttatggcttccgcggcggcgacatccatacctatctgaaagcc
aagcaggtggccgagcaggcgccggcgctggaccagaacttccgctcgcgcccggccgtg
ctgcgcgcgctgcaggcgctgtacgacaacgcgggcgaagatgccttcctcgaacgcgac
atccagttcgagccggtacgcccgggtggcgtgcgtaccgacgaggattacctgcgcgat
ggccgggccgcacctgcactcaccctgcgcctgttgcgcagcgacggcgaaaaagccttc
ggcgccgatgcctcgcgcgacgcagcgacccaggcctgcgtggccgcgatccaccagatc
ctgctggaggcgcgtgccggcaccgcgctgctgcgcgggcgtgcgctgcagcctggtgat
atcgccgtgctggtgcgctcgcatcgcgaagccacgctggtgcagcgcgcgctggctgcg
gtcggcattcccgcagtggcggccggcaagcagagcctgttcgccaccagcgaggcccgt
gacctgcgtgcgctgctgctggccttgctgcaaccggccgacgaagggcgcctgcgcacc
gcattggcaactgtgctgctgggccagcgcgcaagtgcgattgccagcatggagcgcgag
ggcgacctgcagcgcgggttccaggcgcagctgctgcactggcgcgagcgctggcagcgt
ggcggtccgttcgcggtggttgccgatgtctgcgcggcgcagggcgagcgcctgctggcg
ctgatcgatggcgagcggcgcctgaccaattacctgcagctgggcgaactgctgcaggaa
gcctcggcgcaggcactgggcatgcacggcctgctggactggctgcaggggcagatggcc
aacgccgaccaggacgatgagcagcagctgctgcgcttggagtccgacgcgcggcgggtg
cagatcatcaccctgcacaagagcaagggcctggaatacccgctggtgttcctgccgttc
gtggggatcgatggtggcgcgccgaacaccgcttcccactgcaccgtgcacctgcagggc
gagcgtcagctgcattggaagctggacaaggacgacgcctgggaagcggccagcagccag
cgcgagcgcgaacagcgtgcagaagacgcgcgcctgttgtatgtgggattgacccgtgcc
gagcatgcgctgtggatcgccaccggcgatctggctggccacgcgaaaacccgcctggcc
ccgttgctgggcgatctgcaggtgctgcgcgcgcacgcggacgtggagctggatgacagc
gtactgccgggtcgtctaccgcagctgctggccgaaaccgaaggtgagctgcctgcggtg
cgcgcattgacccgccgtgtgccacatgactggtgggtctacagcttcacccagctggcg
catgccgacgctggcaacagcgacgatatcgaagcggcggccaccgaactgccggcaccg
gccgccgacgaacccgccggtgccgagctgccgctggaaccggcattgccggaagccgct
gcagaagacatggcgccgccggatccacgcttcatgggcagccgtttcggcaacgtcctg
cacgatgcgctggagaacgtcgacttcggactgtggaccggctggcagcctgagcaaccg
gcaccggagggacaggccgacgtgctgcgccgctcgctgcacgacgaaggctatgccgac
gaggatctggacgatggcgtggcggtgctggtgccgctggtgggccataccctcaccgtg
ccgctgcccgaaggtggtgcgctgtgcagcgtgcccgagcatgagcgccgggccgagatc
gagttccatttcgccatcgaaccgaccgcagtaccggtgctgctgcagctgctgcacgac
cacggcatctccagcgcgcggcgtggctttggcctgcgcagaaggctggaaggcctgatg
accggcaagatcgatctgacctacgtgcgtgatggccgctggtatgtgctggactacaaa
tccaaccggctgccgggctacagcccggacctgctgcagatcgccatgcgccacagcgag
tacgacctgcaggcgctgatctacaccgtcgcactgcatcgctggctgcgcttccgcctg
ggcgcggcctacgactacgcgcgcgacatgggcggtatccgttatctgttctgccggggt
ctggaggttgccggcaacggcgtgcacgtgcagcgcttcgcaccggaactggtggatgcg
ctggatgccttgtttgccggcggcgaagcggcccaggcagacatggcggcgcgcgcgcgc
ggagaaaccgcatga
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